RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 ZNF788Q6ZQV5 615 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 UTS2BQ765I0 119 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
VPREB3-202ENST00000398465 DNAAF1Q8NEP3 725 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 ANGPTL6Q8NI99 470 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 CNIH3Q8TBE1 160 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 GAFA1Q96PS6 74 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 CCL13Q99616 98 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 NRIP2Q9BQI9 281 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 ZNF222Q9UK12 451 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 DSCAML1Q8TD84 2053 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 STAB1Q9NY15 2570 aa10.59□□□□□ -0.71
VPREB3-202ENST00000398465 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 A6NIN4 97 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 ZNF879B4DU55 563 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 PLATP00750 562 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 LIMS3P0CW19 117 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 LIMS4P0CW20 117 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 PIPP12273 146 aaPredicted RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 ZNF20P17024 532 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 AMY2BP19961 511 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 FPR2P25090 351 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 FUT6P51993 359 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 CAV3P56539 151 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 MED21Q13503 144 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 UBE2V2Q15819 145 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 KRTAP24-1Q3LI83 254 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 C9orf139Q6ZV77 190 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 SPSB1Q96BD6 273 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 SEH1LQ96EE3 360 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 MED30Q96HR3 178 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 COMMD4Q9H0A8 199 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 ISG20L2Q9H9L3 353 aaKnown RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 HES4Q9HCC6 221 aa10.58□□□□□ -0.72
VPREB3-202ENST00000398465 RPUSD1Q9UJJ7 312 aaKnown RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 DIMT1Q9UNQ2 313 aaKnown RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 EXOSC1Q9Y3B2 195 aaKnown RBP10.58□□□□□ -0.72
VPREB3-202ENST00000398465 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 A0A1B0GW55 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 H3BSH0 61 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 SYNGR1O43759 233 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 PSG2P11465 335 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 MMP9P14780 707 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 MYL12AP19105 171 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 PRKACBP22694 351 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 BPIFB3P59826 476 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 GMFBP60983 142 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 FGF12P61328 243 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 SLC34A1Q06495 639 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 CCDC58Q4VC31 144 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DMRTC1Q5HYR2 192 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 METTL11BQ5VVY1 283 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 TMPRSS11AQ6ZMR5 421 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 BTN2A1Q7KYR7 527 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 CALHM1Q8IU99 346 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 ZNF676Q8N7Q3 588 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 TRMT10AQ8TBZ6 339 aaKnown RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 RPS4Y2Q8TD47 263 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 FBLIM1Q8WUP2 373 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 ADAT3Q96EY9 351 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 SNTG1Q9NSN8 517 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 CNOT2Q9NZN8 540 aaKnown RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 DUX4Q9UBX2 424 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 CAB39Q9Y376 341 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-202ENST00000398465 KPTNQ9Y664 436 aa10.57□□□□□ -0.72
VPREB3-202ENST00000398465 TRBV23-1A0A0A0MS06 115 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 H0YJX3 145 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 NXPH2O95156 264 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 ZFPL1O95159 310 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 KNG1P01042 644 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 MT-ND2P03891 347 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 AZGP1P25311 298 aaKnown RBP10.56□□□□□ -0.72
VPREB3-202ENST00000398465 RBP2P50120 134 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
VPREB3-202ENST00000398465 IKZF1Q13422 519 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms