RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CBR1P16152 277 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SUMO3P55854 103 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MTCP1P56278 107 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MZT1Q08AG7 82 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 BATFQ16520 125 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TAF9Q16594 264 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MICBQ29980 383 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PLCXD3Q63HM9 321 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 BAP18Q8IXM2 172 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR5AS1Q8N127 324 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR10G3Q8NGC4 313 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR5M8Q8NGP6 311 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ARL11Q969Q4 196 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 LIPGQ9Y5X9 500 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 NOTCH3Q9UM47 2321 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR5H14A6NHG9 310 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 EFSO43281 561 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MGMTP16455 207 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 WIPI1Q5MNZ9 446 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ASCL4Q6XD76 172 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ACOT7LQ6ZUV0 252 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 C6orf201Q7Z4U5 140 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SGPP2Q8IWX5 399 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR1S1Q8NH92 325 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 FBXW5Q969U6 566 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 RNF166Q96A37 237 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SLCO5A1Q9H2Y9 848 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MGAMO43451 1857 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR2A4O95047 310 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ITGB2P05107 769 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 IFI6P09912 130 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PSMB6P28072 239 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 RFC3P40938 356 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 EFNA3P52797 238 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SP6Q3SY56 376 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 C1orf100Q5SVJ3 147 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 RHBDD1Q8TEB9 315 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 C2CD4CQ8TF44 421 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR2A7Q96R45 310 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM208Q9BTX3 173 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR2J1Q9GZK6 312 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF768Q9H5H4 540 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 UNKLQ9H9P5 680 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 UBE2J1Q9Y385 318 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OPRM1P35372 400 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PPIAP62937 165 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PHLDA2Q53GA4 152 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF813Q6ZN06 617 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 BMPERQ8N8U9 685 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ADPRHL1Q8NDY3 354 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 FNDC9Q8TBE3 224 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 KCNIP3Q9Y2W7 256 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 NCOA6Q14686 2063 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 FAM74A7A6NL05 159 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TNFSF11O14788 317 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TIAF1O95411 115 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PPP1CCP36873 323 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 AKR1C3P42330 323 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 GPM6AP51674 278 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF616Q08AN1 781 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RHEBQ15382 184 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 FAM74A3Q4VXF1 159 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 NHLRC3Q5JS37 347 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 Q6ZRG5 221 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF565Q8N9K5 539 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF845Q96IR2 970 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RCL1Q9Y2P8 373 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 BORCS7-ASMTA0A0B4J1R7 106 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 C5orf63A6NC05 138 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 WIPF3A6NGB9 483 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 NR2C1P13056 603 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CCL4P13236 92 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 UQCRFS1P47985 274 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 HIST1H3AP68431 136 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SLC16A14Q7RTX9 510 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ARHGEF39Q8N4T4 335 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 OR8G5Q8NG78 346 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TERB2Q8NHR7 220 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 MRPS24Q96EL2 167 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 UCN2Q96RP3 112 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 EIF5A2Q9GZV4 153 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TUBG2Q9NRH3 451 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PCDHB16Q9NRJ7 776 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SLC7A11Q9UPY5 501 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 HMSDA8MTL9 139 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PATE3B3GLJ2 98 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 F5H697 171 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 OR5H8P0DN80 308 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 GLULP15104 373 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 THBS4P35443 961 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SSR4P51571 173 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ARF6P62330 175 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 IZUMO4Q1ZYL8 232 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 KRBOX4Q5JUW0 171 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF100Q8IYN0 542 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms