RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 NMES1Q9C002 83 aa12.88□□□□□ -0.35
SH3KBP1-205ENST00000397821 RIMS4Q9H426 269 aaPredicted RBP12.88□□□□□ -0.35
SH3KBP1-205ENST00000397821 NAA60Q9H7X0 242 aa12.88□□□□□ -0.35
SH3KBP1-205ENST00000397821 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
SH3KBP1-205ENST00000397821 SOX15O60248 233 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 FZD2Q14332 565 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF770Q6IQ21 691 aaPredicted RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 SPTA1P02549 2419 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 C5orf49A4QMS7 147 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 M0R143 59 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 KRASP01116 189 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 CXCL12P48061 93 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 CACNA1DQ01668 2161 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 KCNAB3O43448 404 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 CXCL13O43927 109 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 CAPZBP47756 277 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 TMEM215Q68D42 235 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 LINC00696Q6ZRV3 163 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 MRGPREQ86SM8 312 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 FAM173AQ9BQD7 235 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 RTL8AQ9BWD3 113 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 MFNGO00587 321 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 ABCD4O14678 606 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 CDC14BO60729 498 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 GCM2O75603 506 aaPredicted RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF92Q03936 586 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
SH3KBP1-205ENST00000397821 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ERVFC1-1P60608 527 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 TSPO2Q5TGU0 170 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 PRR27Q6MZM9 219 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SPSB1Q96BD6 273 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 GPR87Q9BY21 358 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 METTL12A8MUP2 240 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 CHEK1O14757 476 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ERVS71-1P61550 626 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 CLN3Q13286 438 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 Q5BKY6 102 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SOCS1O15524 211 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 OPN1MWP04001 364 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 OPN1MW2P0DN77 364 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 OPN1MW3P0DN78 364 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 WNT2BQ93097 391 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 MVB12AQ96EY5 273 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 SPINK4O60575 86 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 YIF1AO95070 293 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 MLF2Q15773 248 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 ADPRHL1Q8NDY3 354 aa12.86□□□□□ -0.35
SH3KBP1-205ENST00000397821 MFSD2BA6NFX1 497 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 SH2D1BO14796 132 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 FUT6P51993 359 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 TAS2R45P59539 299 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF345Q14585 488 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ST6GALNAC2Q9UJ37 374 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 FCER1GP30273 86 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 C1QL3Q5VWW1 255 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 LSRQ86X29 649 aaPredicted RBP12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 MSL2Q9HCI7 577 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 CD46P15529 392 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 GPR12P47775 334 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 CYB561P49447 251 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 MYBPHQ13203 477 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 ROBO4Q8WZ75 1007 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 SLC35E1Q96K37 410 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 MRGPRX1Q96LB2 322 aa12.85□□□□□ -0.35
SH3KBP1-205ENST00000397821 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms