RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 A6NLC8 198 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 CSTBP04080 98 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 GRPP07492 148 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 SNRPBP14678 240 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 CLDN12P56749 244 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 RSU1Q15404 277 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 C11orf71Q6IPW1 123 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 WDR86Q86TI4 376 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 CALHM1Q8IU99 346 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 SCCPDHQ8NBX0 429 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 OR51F2Q8NH61 342 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 PSMG3-AS1Q96PY0 264 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 ELL3Q9HB65 397 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 COMMD3Q9UBI1 195 aa19.99■□□□□ 0.79
TSPAN4-202ENST00000397396 A0A1W2PPR1 153 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 TRAPPC2LH3BP13 241 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 IFNL4K9M1U5 179 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 RGS5O15539 181 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 TPD52L2O43399 206 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 KDM4BO94953 1096 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 PLATP00750 562 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 ACAA1P09110 424 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 RAB6AP20340 208 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 C2orf76Q3KRA6 126 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 UBE2NLQ5JXB2 153 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 CDH24Q86UP0 819 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 ITLN1Q8WWA0 313 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 RAB1BQ9H0U4 201 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 SAP30LQ9HAJ7 183 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 OR5V1Q9UGF6 321 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 ABCA4P78363 2273 aa19.98■□□□□ 0.79
TSPAN4-202ENST00000397396 TENM4Q6N022 2769 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 SPRY1O43609 319 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 PAHP00439 452 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 PRAMEF6Q5VXH4 476 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 RNF144BQ7Z419 303 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 SAMD12Q8N8I0 201 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 OR10Z1Q8NGY1 313 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 RAB40AQ8WXH6 277 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 HPS1Q92902 700 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 MRPS24Q96EL2 167 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 CEP19Q96LK0 163 aa19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 NKX3-1Q99801 234 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-202ENST00000397396 SCGNO76038 276 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 SOD3P08294 240 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 SSTR2P30874 369 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 CFHR2P36980 270 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 SLC22A6Q4U2R8 563 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 LRRC28Q86X40 367 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 OR11L1Q8NGX0 322 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 POM121Q96HA1 1249 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 URM1Q9BTM9 101 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 RAB22AQ9UL26 194 aa19.96■□□□□ 0.79
TSPAN4-202ENST00000397396 ROS1P08922 2347 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 A0A0B4J203 849 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 METTL21EPA6NDL7 271 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 TMEM14DPA8MWL7 114 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 H7C417 338 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 CDIPTO14735 213 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 LDLRAD4O15165 306 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 ANGPTL7O43827 346 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 CRTAPO75718 401 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 APOA1P02647 267 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 VSIG8P0DPA2 414 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 GTF2F2P13984 249 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 ART1P52961 327 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 POC1AQ8NBT0 407 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 Q8TCH9 128 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 NEU4Q8WWR8 484 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 C1orf147Q96MC9 270 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 WDFY2Q96P53 400 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 VRK1Q99986 396 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 TMEM59Q9BXS4 323 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 PLEKHF2Q9H8W4 249 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 C1orf123Q9NWV4 160 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 RHBDL2Q9NX52 303 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 LAMP3Q9UQV4 416 aa19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 FASNP49327 2511 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-202ENST00000397396 SPTAN1Q13813 2472 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 TMEM272A0A1B0GTI8 110 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 hCG_1807616A0A1W2PRN6 198 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 LRRC30A6NM36 301 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 NOS1APO75052 506 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 CD8AP01732 235 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 PGA5P0DJD9 388 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 IRF2P14316 349 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 SERPINA2P20848 420 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 TALDO1P37837 337 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 CCL8P80075 99 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 QRFPP83859 136 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 ZNF181Q2M3W8 571 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 ELP2Q6IA86 826 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 FIP1L1Q6UN15 594 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 Q8NFD4 153 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 OR6Q1Q8NGQ2 317 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 SLAMF9Q96A28 289 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 PHF21AQ96BD5 680 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 CACNG6Q9BXT2 260 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 ABCG5Q9H222 651 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 UFSP2Q9NUQ7 469 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms