RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DBHP09172 617 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 CECR9P0C854 216 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 UBBP0CG47 229 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 ANXA3P12429 323 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 GTF2F2P13984 249 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 CCNOP22674 350 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 STEAP1BQ6NZ63 245 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 RNF144BQ7Z419 303 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 MYPOPQ86VE0 399 aaPredicted RBP12.83□□□□□ -0.36
CAPN3-207ENST00000397200 POM121L2Q96KW2 1035 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 OR10A2Q9H208 303 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 PTTG3PQ9NZH4 202 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
CAPN3-207ENST00000397200 SNRPGP15A8MWD9 76 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 CCL2P13500 99 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 RCVRNP35243 200 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 SLC6A9P48067 706 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 HGFACQ04756 655 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 ANGPTL5Q86XS5 388 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 OR4D10Q8NGI6 311 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 NKIRAS2Q9NYR9 191 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
CAPN3-207ENST00000397200 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-207ENST00000397200 DOPEY1Q5JWR5 2465 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CLEC18AA5D8T8 446 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CD3DP04234 171 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CHRM2P08172 466 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 NAT2P11245 290 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CXCL3P19876 107 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 MPZP25189 248 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 OR3A4PP47883 348 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 ZP1P60852 638 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 SNAI3Q3KNW1 292 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CLEC18BQ6UXF7 455 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 Q6ZTK2 550 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 SLC36A1Q7Z2H8 476 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 ACBD4Q8NC06 268 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 CLEC18CQ8NCF0 446 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 ITFG2Q969R8 447 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 SGK3Q96BR1 496 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 ANAPC10Q9UM13 185 aa12.81□□□□□ -0.36
CAPN3-207ENST00000397200 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-207ENST00000397200 A0A0A6YYD4 124 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM235A6NFC5 223 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 CDC14BO60729 498 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 HCKP08631 526 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF735P0CB33 412 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 RAD52P43351 418 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 FAM189A2Q15884 450 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 GFOD2Q3B7J2 385 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF626Q68DY1 528 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 GLIPR1L1Q6UWM5 242 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF782Q6ZMW2 699 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 SPICQ8N5J4 248 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 KCNG3Q8TAE7 436 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 HEATR1Q9H583 2144 aaKnown RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 SLA2Q9H6Q3 261 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 PLSCR3Q9NRY6 295 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 SLC2A8Q9NY64 477 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 MYEF2Q9P2K5 600 aaKnown RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 RTTNQ86VV8 2226 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 IGHV2OR16-5A0A0B4J2B6 119 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 PRSS44E7EML9 344 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 CRYAAP02489 173 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 PTAFRP25105 342 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 CD40P25942 277 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 NAAAQ02083 359 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 UBE2V2Q15819 145 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 Q5BKY6 102 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 LAMTOR1Q6IAA8 161 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 SPACA5Q96QH8 159 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 MYOZ1Q9NP98 299 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 CRIM1Q9NZV1 1036 aa12.8□□□□□ -0.36
CAPN3-207ENST00000397200 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 ELF5Q9UKW6 265 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-207ENST00000397200 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 FABP7O15540 132 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 RAB3DO95716 219 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 CYB5AP00167 134 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 LCATP04180 440 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 GSTP1P09211 210 aaKnown RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF35P13682 527 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 FAHP16930 419 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 IGFBP2P18065 325 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ANXA7P20073 488 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms