RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HPNP05981 417 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MELTFP08582 738 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OR5H8P0DN80 308 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PSMB6P28072 239 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HMGN3Q15651 99 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SFRP4Q6FHJ7 346 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RGS7BPQ6MZT1 257 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF687Q8N1G0 1237 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ST7LQ8TDW4 575 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 YIPF5Q969M3 257 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ICMTO60725 284 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CFPP27918 469 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GABRA2P47869 451 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CLDN6P56747 220 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RPS27AP62979 156 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 UBA52P62987 128 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF85Q03923 595 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IGFBP7Q16270 282 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MICBQ29980 383 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CORO6Q6QEF8 472 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM251Q8N6I4 163 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF611Q8N823 705 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 BMPERQ8N8U9 685 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FADS6Q8N9I5 356 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SYNPO2LQ9H987 977 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PMF1-BGLAPU3KQ54 211 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TRBV5-5A0A0J9YX44 114 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 C2orf72A6NCS6 295 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TOXO94900 526 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ADRA2CP18825 462 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GPR157Q5UAW9 335 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF585AQ6P3V2 769 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF574Q6ZN55 896 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TOMM40LQ969M1 308 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FKBP11Q9NYL4 201 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 REV3LO60673 3130 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MASP2O00187 686 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SRSF5Q13243 272 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR8G1Q15617 311 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DEFB124Q8NES8 71 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR52I2Q8NH67 350 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ADTRPQ96IZ2 230 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ST6GALNAC5Q9BVH7 336 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TAS2R4Q9NYW5 299 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 IGKV3D-15A0A087WSY6 115 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 IGLV1-36A0A0B4J1U3 117 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR5H14A6NHG9 310 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PLATP00750 562 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RAB11AP62491 216 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MIDNQ504T8 468 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TIMM23BQ5SRD1 257 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF362Q5T0B9 420 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 C20orf196Q8IYI0 205 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PINX1Q96BK5 328 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MSI2Q96DH6 328 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GUCD1Q96NT3 240 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TTTY12Q9BZ98 90 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF703Q9H7S9 590 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GNG12Q9UBI6 72 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 A0A0J9YW62 118 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 E5RGE8 158 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 S100A6P06703 90 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CLDN12P56749 244 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TMPRSS9Q7Z410 1059 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR2AK2Q8NG84 335 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RTN4IP1Q8WWV3 396 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CHIAQ9BZP6 476 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RAB18Q9NP72 206 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MRPL15Q9P015 296 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DUSP13Q9UII6 198 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ST6GALNAC2Q9UJ37 374 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 NSG2Q9Y328 171 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM235A6NFC5 223 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 AQP7O14520 342 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CDS2O95674 445 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FAHP16930 419 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PTGDSP41222 190 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ACBD4Q8NC06 268 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR56B2PQ8NGI1 322 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RPS4Y2Q8TD47 263 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF629Q9UEG4 869 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 C7orf66A4D0T2 115 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 G3V3Y1 287 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RAB7AP51149 207 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MOB3CQ70IA8 216 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CCDC28AQ8IWP9 274 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SLC38A6Q8IZM9 456 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CADM3Q8N126 398 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 POC1BQ8TC44 478 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SGK3Q96BR1 496 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PIK3IP1Q96FE7 263 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 HIPK2Q9H2X6 1198 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DECR2Q9NUI1 292 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OPN4Q9UHM6 478 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TNRC6AQ8NDV7 1962 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 UMAD1C9J7I0 102 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ABCD4O14678 606 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CAV2P51636 162 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TAGLNQ01995 201 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms