RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CPDO75976 1380 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 MTUS2Q5JR59 1369 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 A0A1B0GV72 72 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 NKX2-6A6NCS4 301 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR2AT4A6NND4 320 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 C9J4A7 227 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 M0QZ92 97 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 ATP8B1O43520 1251 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 SSNA1O43805 119 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 HPGDSO60760 199 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 MPDU1O75352 247 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 VAMP5O95183 116 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CALB1P05937 261 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CDK1P06493 297 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 PGA5P0DJD9 388 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CELP19835 753 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CEACAM6P40199 344 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CYB561P49447 251 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 RAB7AP51149 207 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CCR6P51684 374 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR4D2P58180 307 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 PPP1CBP62140 327 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 SRSF6Q13247 344 aaKnown RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 TPBGQ13641 420 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 TRIQKQ629K1 86 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 DRAM2Q6UX65 266 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 HORMAD1Q86X24 394 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF433Q8N7K0 673 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 C12orf29Q8N999 325 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 TMEM35BQ8NCS4 154 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 ITFG1Q8TB96 612 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 PIGXQ8TBF5 258 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 PPWD1Q96BP3 646 aaKnown RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 DGCR14Q96DF8 476 aaKnown RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 SLC25A2Q9BXI2 301 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 BEX2Q9BXY8 128 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 FAM107BQ9H098 131 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 LINC00597Q9H2U6 94 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR51B5Q9H339 312 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 TRABDQ9H4I3 376 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF331Q9NQX6 463 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 GID8Q9NWU2 228 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 TFR2Q9UP52 801 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 MMACHCQ9Y4U1 282 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 PIKFYVEQ9Y2I7 2098 aa3.31□□□□□ -1.88
HMGB1P10-201ENST00000395823 C9orf84Q5VXU9 1444 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 EIF3AQ14152 1382 aaKnown RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ABCB11O95342 1321 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 A0A1W2PRG6 482 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 SLC5A10A0PJK1 596 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 DFFAO00273 331 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 MAGEB4O15481 346 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 TGOLN2O43493 480 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 RDH16O75452 317 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 HPRT1P00492 218 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 HLA-AP01891 365 aaKnown RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CATP04040 527 aaKnown RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ISG15P05161 165 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ERGP11308 486 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 COILP38432 576 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CSNK1A1P48729 337 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF121P58317 390 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 AESQ08117 197 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 C2orf80Q0P641 193 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF266Q14584 549 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 POU6F1Q14863 301 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 SLC9A3R2Q15599 337 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 HACD4Q5VWC8 232 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 SYPL2Q5VXT5 272 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 DUPD1Q68J44 220 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ARL9Q6T311 187 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 FAM131AQ6UXB0 335 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 WDR82Q6UXN9 313 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 STK40Q8N2I9 435 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CHST4Q8NCG5 386 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR2Y1Q8NGV0 311 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 LRRC29Q8WV35 223 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 SGTBQ96EQ0 304 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF75AQ96N20 296 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 PRAP1Q96NZ9 151 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 MFSD1Q9H3U5 465 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 TMBIM4Q9HC24 238 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 XPNPEP1Q9NQW7 623 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CMTM6Q9NX76 183 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 CYB5R1Q9UHQ9 305 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 FBXL3Q9UKT7 428 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 RAB26Q9ULW5 256 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 GINS2Q9Y248 185 aa3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 TP53BP1Q12888 1972 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 SETD1AO15047 1707 aaKnown RBP3.3□□□□□ -1.88
HMGB1P10-201ENST00000395823 IGHV3-74A0A0B4J1X5 117 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms