RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OR9Q2Q8NGE9 314 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 OR2T27Q8NH04 317 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 OR4Q3Q8NH05 313 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 AQP3Q92482 292 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 MYDGFQ969H8 173 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 MALSU1Q96EH3 234 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 LRGUKQ96M69 825 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 ZNF488Q96MN9 340 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 C1orf21Q9H246 121 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
SNCA-205ENST00000394991 TCRBV5S2A0A599 114 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 TCRBV4S1A1TA0A5B7 111 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 C17orf98A8MV24 154 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 DYNLT3P51808 116 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 GNG3P63215 75 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 CEP78Q5JTW2 689 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 LCN8Q6JVE9 175 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 RPL13AP3Q6NVV1 102 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 C10orf99Q6UWK7 81 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 ERI1Q8IV48 349 aaKnown RBP12.67□□□□□ -0.38
SNCA-205ENST00000394991 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 BTBD10Q9BSF8 475 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
SNCA-205ENST00000394991 TENM2Q9NT68 2774 aa12.67□□□□□ -0.38
SNCA-205ENST00000394991 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 A0A1W2PR64 198 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 F2RL2O00254 374 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 TNFRSF11BO00300 401 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 GYG2O15488 501 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 H2BFMP0C1H6 154 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 PIPP12273 146 aaPredicted RBP12.66□□□□□ -0.38
SNCA-205ENST00000394991 FAM98BQ52LJ0 330 aaKnown RBP12.66□□□□□ -0.38
SNCA-205ENST00000394991 KRT74Q7RTS7 529 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 OR11H6Q8NGC7 330 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 OR8B12Q8NGG6 310 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 ASB9Q96DX5 294 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 TSSK6Q9BXA6 273 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 MED20Q9H944 212 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 TBC1D23Q9NUY8 699 aa12.66□□□□□ -0.38
SNCA-205ENST00000394991 MEX3AA1L020 520 aaKnown RBP12.65□□□□□ -0.38
SNCA-205ENST00000394991 KRT36O76013 467 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 PRDX2P32119 198 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 SMIM21Q3B7S5 101 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 DNAL1Q4LDG9 190 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 HAGHLQ6PII5 290 aaPredicted RBP12.65□□□□□ -0.38
SNCA-205ENST00000394991 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 RASSF6Q6ZTQ3 369 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
SNCA-205ENST00000394991 CALHM1Q8IU99 346 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 POC1AQ8NBT0 407 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 ZNF671Q8TAW3 534 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 HIST1H2AAQ96QV6 131 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 MAGIXQ9H6Y5 334 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 RASL12Q9NYN1 266 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 HILPDAQ9Y5L2 63 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 U3KQK5 164 aa12.65□□□□□ -0.38
SNCA-205ENST00000394991 RYR2Q92736 4967 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 FAM183AA6NL82 134 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 FAM90A22PA8MWA6 464 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 SLC1A7O00341 560 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 BLVRAP53004 296 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
SNCA-205ENST00000394991 PPP1R8Q12972 351 aaKnown RBP12.64□□□□□ -0.39
SNCA-205ENST00000394991 CEACAM21Q3KPI0 293 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 ZNF770Q6IQ21 691 aaPredicted RBP12.64□□□□□ -0.39
SNCA-205ENST00000394991 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 OR13D1Q8NGV5 346 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 ARMC1Q9NVT9 282 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 LYVE1Q9Y5Y7 322 aa12.64□□□□□ -0.39
SNCA-205ENST00000394991 OR5B21A6NL26 309 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 CCNB2O95067 398 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 SOX14O95416 240 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 TK1P04183 234 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 PGA5P0DJD9 388 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 GSTT1P30711 240 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 MAGEA2P43356 314 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 HMGA2P52926 109 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 SLC34A1Q06495 639 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 DYNC1I2Q13409 638 aaKnown RBP12.63□□□□□ -0.39
SNCA-205ENST00000394991 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 SHFQ7M4L6 423 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 MRPL41Q8IXM3 137 aaKnown RBP12.63□□□□□ -0.39
SNCA-205ENST00000394991 BATF2Q8N1L9 274 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 FAM81AQ8TBF8 368 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 DPF1Q92782 380 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 REEP1Q9H902 201 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 KLHDC2Q9Y2U9 406 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
SNCA-205ENST00000394991 U3KQV3 271 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
SNCA-205ENST00000394991 CLIC3O95833 236 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 GASTP01350 101 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 RBP4P02753 201 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 CHRM2P08172 466 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms