RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TMEM186Q96B77 213 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 ORAI1Q96D31 301 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 NEIL1Q96FI4 390 aaPredicted RBP16.62■□□□□ 0.25
SNCA-203ENST00000394986 TECTBQ96PL2 329 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 ZCCHC4Q9H5U6 513 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4Q9UBX2 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 MIOXQ9UGB7 285 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 NF1P21359 2839 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 KIAA1324LA8MWY0 1029 aaPredicted RBP16.61■□□□□ 0.25
SNCA-203ENST00000394986 TNFRSF13BO14836 293 aaPredicted RBP16.61■□□□□ 0.25
SNCA-203ENST00000394986 ADAM20O43506 726 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 INMTO95050 263 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 RPSAP08865 295 aaKnown RBP16.61■□□□□ 0.25
SNCA-203ENST00000394986 OCM2P0CE71 109 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 GLRA1P23415 457 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 EEF1B2P24534 225 aaKnown RBP16.61■□□□□ 0.25
SNCA-203ENST00000394986 DVL1P1P54792 670 aaPredicted RBP16.61■□□□□ 0.25
SNCA-203ENST00000394986 RPS11P62280 158 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNCA-203ENST00000394986 SPHARQ15513 63 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 MED22Q15528 200 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 MICBQ29980 383 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 PRSS48Q7RTY5 328 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 PARP16Q8N5Y8 322 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 OR8B3Q8NGG8 313 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 RFT1Q96AA3 541 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 OPALINQ96PE5 141 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 OR8B2Q96RD0 313 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 RASSF4Q9H2L5 321 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 TAS2R4Q9NYW5 299 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 DNAJB11Q9UBS4 358 aa16.61■□□□□ 0.25
SNCA-203ENST00000394986 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNCA-203ENST00000394986 SETD2Q9BYW2 2564 aaPredicted RBP16.6■□□□□ 0.25
SNCA-203ENST00000394986 OCMP0CE72 109 aaPredicted RBP16.6■□□□□ 0.25
SNCA-203ENST00000394986 PGA5P0DJD9 388 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 MPZP25189 248 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 PITPNBP48739 271 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 POU3F4P49335 361 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 RBP2P50120 134 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 KCNJ8Q15842 424 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 ESCO2Q56NI9 601 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 ZNF841Q6ZN19 808 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 SERPINA12Q8IW75 414 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 POC1AQ8NBT0 407 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 ZNF671Q8TAW3 534 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 TMEM106AQ96A25 262 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 SLAMF9Q96A28 289 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 CCL13Q99616 98 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 SMURF1Q9HCE7 757 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 BLOC1S6Q9UL45 172 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 LRCH1Q9Y2L9 728 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 MALRD1Q5VYJ5 2156 aa16.6■□□□□ 0.25
SNCA-203ENST00000394986 TRBV5-5A0A0J9YX44 114 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 SULT1B1O43704 296 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 FCN3O75636 299 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 MUC1P15941 1255 aaPredicted RBP16.59■□□□□ 0.25
SNCA-203ENST00000394986 AMY2BP19961 511 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 PRKACBP22694 351 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 ATP1B3P54709 279 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 MTCP1P56278 107 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 CR1LQ2VPA4 569 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 STUMQ69YW2 141 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 SLC25A26Q70HW3 274 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 NLRC3Q7RTR2 1065 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 FGFRL1Q8N441 504 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 FAM216BQ8N7L0 139 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 DNAAF1Q8NEP3 725 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 OR51A2Q8NGJ7 313 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 OR5D14Q8NGL3 314 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 SPSB1Q96BD6 273 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 SSBP3Q9BWW4 388 aaPredicted RBP16.59■□□□□ 0.25
SNCA-203ENST00000394986 PKIBQ9C010 78 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 NLKQ9UBE8 527 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 POLDIP2Q9Y2S7 368 aa16.59■□□□□ 0.25
SNCA-203ENST00000394986 SVEP1Q4LDE5 3571 aa16.58■□□□□ 0.25
SNCA-203ENST00000394986 TRAV20A0A0B4J274 112 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 A8MXK9 166 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 TMPRSS2O15393 492 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 FOXH1O75593 365 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 CD2P06729 351 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 SELLP14151 372 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 GNB2P62879 340 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 BDH1Q02338 343 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 ACSM1Q08AH1 577 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 IL24Q13007 206 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 YIF1BQ5BJH7 314 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 WDR25Q64LD2 544 aaPredicted RBP16.58■□□□□ 0.24
SNCA-203ENST00000394986 CRIP3Q6Q6R5 217 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 LHFPL2Q6ZUX7 228 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 OR5D18Q8NGL1 313 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 TMIGD2Q96BF3 282 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 OR14A2Q96R54 314 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 NKX3-1Q99801 234 aaPredicted RBP16.58■□□□□ 0.24
SNCA-203ENST00000394986 NRIP2Q9BQI9 281 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 MMP26Q9NRE1 261 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 MTCH1Q9NZJ7 389 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 CLN8Q9UBY8 286 aa16.58■□□□□ 0.24
SNCA-203ENST00000394986 A0A1W2PPK0 400 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 F8VVB4 439 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 F8VWA3 439 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 TRAPPC2LH3BP13 241 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms