RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CLEC9AQ6UXN8 241 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 ZADH2Q8N4Q0 377 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 LILRB4Q8NHJ6 448 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 GPX8Q8TED1 209 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 LYZL4Q96KX0 146 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 SHPKQ9UHJ6 478 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 ATPAF1Q5TC12 328 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 CPEB3Q8NE35 698 aaKnown RBP13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 UBQLN2Q9UHD9 624 aa13.85□□□□□ -0.19
SMARCD1-202ENST00000394963 SERPINF1P36955 418 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 P2RY4P51582 365 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 AKR1C2P52895 323 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 AKR1C1Q04828 323 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 SNTB1Q13884 538 aaKnown RBP13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 SMCO1Q147U7 214 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 SLC5A7Q9GZV3 580 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 A0A1B0GUH1 482 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 PRKACBP22694 351 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 OMGP23515 440 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 PTGS2P35354 604 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 DMXL2Q8TDJ6 3036 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 FBXO24O75426 580 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 OR5H8P0DN80 308 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 PRDX4Q13162 271 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 CLVS2Q5SYC1 327 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 TMEM123Q8N131 208 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 DEFB108BQ8NET1 73 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 OR1J1Q8NGS3 322 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 PPP1R1CQ8WVI7 109 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 PP6455Q8WZ26 134 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 WNT5BQ9H1J7 359 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 UBE2J1Q9Y385 318 aaPredicted RBP13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 ZNF292O60281 2723 aa13.84□□□□□ -0.19
SMARCD1-202ENST00000394963 WRBO00258 174 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 IFNA21P01568 189 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 FCGR2CP31995 323 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 RAP2BP61225 183 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 ERVS71-1P61550 626 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 PLAC9Q5JTB6 97 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 PAQR4Q8N4S7 273 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 CPNE2Q96FN4 548 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 GSTZ1O43708 216 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 TIMM8AO60220 97 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 EDDM3AQ14507 147 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 CLPPQ16740 277 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 TCTE3Q8IZS6 198 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 NANOS1Q8WY41 292 aaKnown RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 SLC25A21Q9BQT8 299 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 SLA2Q9H6Q3 261 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 SCO1O75880 301 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 NXPH2O95156 264 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 DIRAS3O95661 229 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 PPP3CBP16298 524 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 H3F3AP84243 136 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 HGFACQ04756 655 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 SLC25A53Q5H9E4 307 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 OR2B11Q5JQS5 317 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 MDP1Q86V88 176 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 OSR2Q8N2R0 312 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF680Q8NEM1 530 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 OR6S1Q8NH40 331 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 OR51H1Q8NH63 302 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 FBXW5Q969U6 566 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 LOXL4Q96JB6 756 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 SF3B5Q9BWJ5 86 aaKnown RBP13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 IL36RNQ9UBH0 155 aa13.83□□□□□ -0.2
SMARCD1-202ENST00000394963 NBEAQ8NFP9 2946 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 LUMP51884 338 aaPredicted RBP13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 LGALSLQ3ZCW2 172 aaPredicted RBP13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 FAM109AQ8N4B1 249 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 SLC30A7Q8NEW0 376 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 UQCC2Q9BRT2 126 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 WDR13Q9H1Z4 485 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 MSL2Q9HCI7 577 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 VSIG4Q9Y279 399 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 KCNIP3Q9Y2W7 256 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF816-ZNF321PA0A0X1KG74 233 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF716A6NP11 495 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 HSD17B6O14756 317 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ISG15P05161 165 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 CELA3BP08861 270 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF17P17021 662 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 THBS4P35443 961 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 FOXO1Q12778 655 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 FAM189A2Q15884 450 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 IP6K3Q96PC2 410 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 FAM234AQ9H0X4 552 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 TRAPPC2P0DI81 140 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 TRAPPC2BP0DI82 140 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ASCL1P50553 236 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF83P51522 516 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 ZP1P60852 638 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 HOXA4Q00056 320 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms