RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 C12orf57Q99622 126 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF2Q9BSG1 426 aaPredicted RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 FBXL17Q9UF56 701 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 OTOGLQ3ZCN5 2332 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 MSTNO14793 375 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 DHRS3O75911 302 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 PNLIPP16233 465 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 CPT2P23786 658 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 FCGR2CP31995 323 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 LSM6P62312 80 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 HDHD3Q9BSH5 251 aaPredicted RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 ELL3Q9HB65 397 aaPredicted RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 A0A0U1RQV5 110 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 LOC102725191A0A1B0GVB3 256 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 PQLC2LA1A4F0 135 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 FAM157AC9JC47 383 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 K7EPK0 472 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 CA11O75493 328 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 CD80P33681 288 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 KCNJ3P48549 501 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 ENDOGQ14249 297 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 RSPO1Q2MKA7 263 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 ZFP82Q8N141 532 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 FAM71E2Q8N5Q1 922 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 C2CD4CQ8TF44 421 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 OR6C1Q96RD1 312 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 TUBD1Q9UJT1 453 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 HDGFL3Q9Y3E1 203 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 RRP8O43159 456 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 DEDDO75618 318 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 MSR1P21757 451 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 ADH6P28332 368 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 Q6ZRG5 221 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 SULF2Q8IWU5 870 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 FADS6Q8N9I5 356 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 SLC25A43Q8WUT9 341 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 HAS2Q92819 552 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 MRPL24Q96A35 216 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 S100A13Q99584 98 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 CHST5Q9GZS9 411 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 PIGLQ9Y2B2 252 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 AMDHD2Q9Y303 409 aa16.03■□□□□ 0.16
PCDHA1-202ENST00000394633 COLCA2A8K830 154 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 TLX3O43711 291 aaPredicted RBP16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 DKK1O94907 266 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 GAPDHP04406 335 aaKnown RBP16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 CTSDP07339 412 aaPredicted RBP16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 GABRR1P24046 479 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 GGNBP1Q5YKI7 109 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 DHRS11Q6UWP2 260 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 SGPP2Q8IWX5 399 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 SKA3Q8IX90 412 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 PP6455Q8WZ26 134 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 PRRX2Q99811 253 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 SMIM3Q9BZL3 60 aa16.02■□□□□ 0.16
PCDHA1-202ENST00000394633 ARID1AO14497 2285 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 IGHV5-10-1A0A0J9YXX1 117 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 CRYM-AS1A6NIL9 109 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 OR8U9P0C7N5 309 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 ECI1P42126 302 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 F2RL1P55085 397 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 TMEM33P57088 247 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 SLC35A1P78382 337 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 PEA15Q15121 130 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 PPA1Q15181 289 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 GJC3Q8NFK1 279 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 OR8U1Q8NH10 309 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 SLC22A8Q8TCC7 542 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 SPACA9Q96E40 222 aaPredicted RBP16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 KIRREL1Q96J84 757 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 RASL10BQ96S79 203 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 SULT4A1Q9BR01 284 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 NELFAQ9H3P2 528 aa16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 LSM5Q9Y4Y9 91 aaKnown RBP16.02■□□□□ 0.15
PCDHA1-202ENST00000394633 GALR2O43603 387 aaPredicted RBP16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 SCRG1O75711 98 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 CSNK1A1P48729 337 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 ARL6IP1Q15041 203 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 PLA2G2CQ5R387 149 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 PRAMEF20Q5VT98 475 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 RTL6Q6ICC9 239 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 LCN10Q6JVE6 187 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 Q6ZSR3 168 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 LRRC18Q8N456 261 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 NAT6Q93015 286 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 NABP1Q96AH0 204 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 PIGQQ9BRB3 760 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 LIME1Q9H400 295 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 PLEKHJ1Q9NW61 149 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 KIAA1549Q9HCM3 1950 aa16.01■□□□□ 0.15
PCDHA1-202ENST00000394633 GDF9O60383 454 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 MTRF1O75570 445 aaKnown RBP16■□□□□ 0.15
PCDHA1-202ENST00000394633 JTBO76095 146 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 DBHP09172 617 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
PCDHA1-202ENST00000394633 SMCO1Q147U7 214 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms