RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TMEM105Q8N8V8 129 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 MARCH1Q8TCQ1 289 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 DYRK2Q92630 601 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SPTSSAQ969W0 71 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 KTI12Q96EK9 354 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TXNIPQ9H3M7 391 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ZCCHC4Q9H5U6 513 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 C1orf123Q9NWV4 160 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 FLRT3Q9NZU0 649 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 PITPNC1Q9UKF7 332 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TCFL5Q9UL49 500 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TP53TG5Q9Y2B4 290 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 EXOGQ9Y2C4 368 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 A0A1W2PNR3 127 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 A0A1W2PPQ1 181 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 COLCA2A8K830 154 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SLC33A1O00400 549 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 MRPL33O75394 65 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 GPANK1O95872 356 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 IGHA1P01876 353 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 CRHP06850 196 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 CD82P27701 267 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 HERV-K104P61576 105 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 NUTF2P61970 127 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 IGLV3-21P80748 117 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 DHODHQ02127 395 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 MGAT2Q10469 447 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 FOXF1Q12946 379 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 MRPL49Q13405 166 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 CD226Q15762 336 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ISXQ2M1V0 245 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 C2orf76Q3KRA6 126 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ATPAF1Q5TC12 328 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 WDR88Q6ZMY6 472 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 BAGE3Q86Y29 109 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 BAGE2Q86Y30 109 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 C9orf40Q8IXQ3 194 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SYS1Q8N2H4 156 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ADPRHL1Q8NDY3 354 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 OR4S1Q8NGB4 309 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 CT55Q8WUE5 264 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ZNF775Q96BV0 537 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 NDUFAF3Q9BU61 184 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 NMNAT2Q9BZQ4 307 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 C1orf198Q9H425 327 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 MMP25Q9NPA2 562 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 EHFQ9NZC4 300 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SLC7A11Q9UPY5 501 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 HDGFL3Q9Y3E1 203 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 SIRT4Q9Y6E7 314 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 TICRRQ7Z2Z1 1910 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 KIAA1671Q9BY89 1806 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ARHGEF17Q96PE2 2063 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 TMEM269A0A1B0GVZ9 245 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 A0A1W2PPE3 182 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF850A8MQ14 1090 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RBMXL2O75526 392 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 IGKV1D-16P01601 117 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ADRA2AP08913 450 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF883P0CG24 379 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 SLC25A4P12235 298 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 GNRHRP30968 328 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF136P52737 540 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 DSCR4P56555 118 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 NCR3LG1Q68D85 454 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C17orf82Q86X59 251 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF596Q8TC21 504 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 PELI1Q96FA3 418 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C2orf50Q96LR7 162 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 MS4A10Q96PG2 267 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 AK3Q9UIJ7 227 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RPH3ALQ9UNE2 315 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RNF24Q9Y225 148 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 COA3Q9Y2R0 106 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 KLF13Q9Y2Y9 288 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 WSB1Q9Y6I7 421 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 TMEM212A6NML5 194 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 F5H5K5 113 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 CDC42EP2O14613 210 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ARPC3O15145 178 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 CSTBP04080 98 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 SNRPCP09234 159 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 OR8U8P0C7N1 319 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ACKR3P25106 362 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 S100A7P31151 101 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 FXYD4P59646 89 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RPS18P62269 152 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 LSM11P83369 360 aaKnown RBP eCLIP5.05□□□□□ -1.6
RFFL-202ENST00000394597 FZD5Q13467 585 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 COL5A1-AS1Q5SY13 56 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ABHD12BQ7Z5M8 362 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 KCNE4Q8WWG9 221 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RASL10BQ96S79 203 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 PLEK2Q9NYT0 353 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 CGGBP1Q9UFW8 167 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 HHLA2Q9UM44 414 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms