RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ZNF385AQ96PM9 386 aaKnown RBP14.64□□□□□ -0.07
SCN3B-202ENST00000392770 PECRQ9BY49 303 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 SLC26A1Q9H2B4 701 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 RCL1Q9Y2P8 373 aaKnown RBP14.64□□□□□ -0.07
SCN3B-202ENST00000392770 CHD5Q8TDI0 1954 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 GPR31O00270 319 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 CTHRC1Q96CG8 243 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 S1PR3Q99500 378 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 ANKRD36A6QL64 1941 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 FTH1P19P0C7X4 201 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 DXOO77932 396 aaKnown RBP14.64□□□□□ -0.07
SCN3B-202ENST00000392770 CALCRP30988 508 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 WDR89Q96FK6 387 aaPredicted RBP14.64□□□□□ -0.07
SCN3B-202ENST00000392770 MAGT1Q9H0U3 335 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 KCNIP2Q9NS61 270 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 NTMQ9P121 344 aa14.64□□□□□ -0.07
SCN3B-202ENST00000392770 TRGV10A0A0A0MS01 117 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 JTBO76095 146 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 LIMK1P53667 647 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 ANGPTL4Q9BY76 406 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 MGAMO43451 1857 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 NME2P1O60361 137 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 IGLV3-19P01714 112 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 NKX6-1P78426 367 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-202ENST00000392770 OR13G1Q8NGZ3 307 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 NANPQ8TBE9 248 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 ADAM19Q9H013 955 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 PLSCR3Q9NRY6 295 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 LSM2Q9Y333 95 aaKnown RBP14.63□□□□□ -0.07
SCN3B-202ENST00000392770 AGFG2O95081 481 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 GABRA1P14867 456 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 TNFRSF1AP19438 455 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 IGLV3-21P80748 117 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-202ENST00000392770 GVQW1Q8N7I0 195 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 UBALD1Q8TB05 177 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 SHARPINQ9H0F6 387 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 TAAR3PQ9P1P4 343 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 GSTZ1O43708 216 aaPredicted RBP14.63□□□□□ -0.07
SCN3B-202ENST00000392770 TESK1Q15569 626 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 ASB5Q8WWX0 329 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 AMDHD2Q9Y303 409 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 HIKESHIQ53FT3 197 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 SFT2D1Q8WV19 159 aa14.63□□□□□ -0.07
SCN3B-202ENST00000392770 CTDSPLO15194 276 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 NGFP01138 241 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 SPINK2P20155 84 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 FAM181AQ8N9Y4 354 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 PLEKHA2Q9HB19 425 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 PSENENQ9NZ42 101 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 AK3Q9UIJ7 227 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 ARID1BQ8NFD5 2236 aaPredicted RBP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 TRAV8-7A0A075B6U6 113 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 MASP2O00187 686 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 CEACAM6P40199 344 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 MDH2P40926 338 aaKnown RBP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 INPP5JQ15735 1006 aaPredicted RBP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 ST7LQ8TDW4 575 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 FBLIM1Q8WUP2 373 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 EDARADDQ8WWZ3 215 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 CXXC4Q9H2H0 198 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 SIRT4Q9Y6E7 314 aaPredicted RBP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 ZFP92A6NM28 416 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 COX6A1P12074 109 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 S100A7P31151 101 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 GZMKP49863 264 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 NAA40Q86UY6 237 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 LRRC29Q8WV35 223 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 TMED6Q8WW62 240 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 HPSE2Q8WWQ2 592 aa14.62□□□□□ -0.07
SCN3B-202ENST00000392770 SUB1P53999 127 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 SNTB1Q13884 538 aaKnown RBP14.62□□□□□ -0.07
SCN3B-202ENST00000392770 A0A0J9YW62 118 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 TIAF1O95411 115 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 KLF3P57682 345 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 PDCD6O75340 191 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 MUC20Q8N307 709 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 GSX2Q9BZM3 304 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 SLC25A32Q9H2D1 315 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 PPP1R14DQ9NXH3 145 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 NUP214P35658 2090 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 ARPC4-TTLL3A0A0A6YYG9 625 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 DNPH1O43598 174 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 NANOS3P60323 173 aaKnown RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 RPS16P62249 146 aaKnown RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 EXOSC2Q13868 293 aaKnown RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 SP6Q3SY56 376 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 TMEM211Q6ICI0 200 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 KCNIP4Q6PIL6 250 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 LRRTM1Q86UE6 522 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 BCL3P20749 454 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 PPP1R1AQ13522 171 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 MICBQ29980 383 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 LRRC10Q5BKY1 277 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 C10orf35Q96D05 121 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 MPC1Q9Y5U8 109 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 NDUFB3O43676 98 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 ZBTB25P24278 435 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 MPGP29372 298 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 KIR3DL2P43630 455 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 TMEM108Q6UXF1 575 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms