RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 TFAP2EQ6VUC0 442 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 ARHGEF39Q8N4T4 335 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 SPICQ8N5J4 248 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 BVESQ8NE79 360 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 OR52H1Q8NGJ2 320 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 OR51F2Q8NH61 342 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 SYNPRQ8TBG9 265 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 MARC2Q969Z3 335 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 HINT2Q9BX68 163 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 RSPO3Q9BXY4 272 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-205ENST00000392004 CST11Q9H112 138 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 TAS2R3Q9NYW6 316 aa9.01□□□□□ -0.97
COL6A3-205ENST00000392004 SIRPB1O00241 398 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 GMDSO60547 372 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 SLC34A2O95436 690 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 EPXP11678 715 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 RPS4Y1P22090 263 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 AGTR1P30556 359 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 PPP1CBP62140 327 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 HSD17B13Q7Z5P4 300 aaPredicted RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 OR11L1Q8NGX0 322 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ZNF524Q96C55 264 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 CPNE2Q96FN4 548 aaPredicted RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 SF3B5Q9BWJ5 86 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 REG4Q9BYZ8 158 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 TMEM38BQ9NVV0 291 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 CISD1Q9NZ45 108 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 V9GY05 133 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 HIVEP2P31629 2446 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 TMEM212A6NML5 194 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ZFPL1O95159 310 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 SPDEFO95238 335 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ZNF708P17019 499 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 PTAFRP25105 342 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 Q499Y3 187 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 WDR38Q5JTN6 314 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 GLDNQ6ZMI3 551 aaPredicted RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 MDS2Q8NDY4 140 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 OR52I2Q8NH67 350 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 SLC25A40Q8TBP6 338 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 CASTOR1Q8WTX7 329 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 EMG1Q92979 244 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 PELI1Q96FA3 418 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 TECTBQ96PL2 329 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 JAM3Q9BX67 310 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 RPA2P15927 270 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ANXA7P20073 488 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 BDKRB2P30411 391 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ALDH3B1P43353 468 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 PSG4Q00888 419 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 CNN3Q15417 329 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 CDNFQ49AH0 187 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 GLIPR1L1Q6UWM5 242 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 CMTM4Q8IZR5 234 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 MAFIPQ8WZ33 124 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 C4orf45Q96LM5 186 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 DNTTIP1Q9H147 329 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 ACKR4Q9NPB9 350 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 TNFRSF19Q9NS68 423 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 MRPS28Q9Y2Q9 187 aaKnown RBP9□□□□□ -0.97
COL6A3-205ENST00000392004 STARD10Q9Y365 291 aa9□□□□□ -0.97
COL6A3-205ENST00000392004 TRAV1-2A0A0B4J238 106 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 GABARAPH6UMI1 98 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 CTDSPLO15194 276 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 GLRA1P23415 457 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 BLVRBP30043 206 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-205ENST00000392004 C15orf40Q8WUR7 153 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 PTDSS2Q9BVG9 487 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 ZNF391Q9UJN7 358 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 KLHDC2Q9Y2U9 406 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 A0A1W2PNV4 684 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 A8MXK9 166 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 F5H5P2 479 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 SIX6O95475 246 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 CELA3BP08861 270 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 RPS23P62266 143 aaKnown RBP8.99□□□□□ -0.97
COL6A3-205ENST00000392004 SLC26A10Q8NG04 563 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-205ENST00000392004 OR8B4Q96RC9 309 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 MFFQ9GZY8 342 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 TMEM100Q9NV29 134 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 A0A0G2JK05 382 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 PTP4A3O75365 173 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 GTF2F2P13984 249 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 PTGDSP41222 190 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 KLF3P57682 345 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-205ENST00000392004 ERVS71-1P61550 626 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 PDCD10Q9BUL8 212 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 ADGRL4Q9HBW9 690 aa8.99□□□□□ -0.97
COL6A3-205ENST00000392004 ZNF629Q9UEG4 869 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-205ENST00000392004 SNRPGP15A8MWD9 76 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 HPNP05981 417 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 CPN1P15169 458 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 AMY2BP19961 511 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 GLP1RP43220 463 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 CDH26Q8IXH8 852 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 PXT1Q8NFP0 134 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 OR51A4Q8NGJ6 313 aa8.98□□□□□ -0.97
COL6A3-205ENST00000392004 GCDHQ92947 438 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms