RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZNF30P17039 623 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 IMPDH1P20839 514 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CD34P28906 385 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TNFSF9P41273 254 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CX3CR1P49238 355 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ACOT2P49753 483 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 IDH3GP51553 393 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CRISP1P54107 249 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 FGF8P55075 233 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 AP1S2P56377 157 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 AP1S1P61966 158 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 RANP62826 216 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 PSPHP78330 225 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 FAM3AP98173 230 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 MLLT11Q13015 90 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SRSF6Q13247 344 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 KRR1Q13601 381 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 MAD2L1BPQ15013 274 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TOMM34Q15785 309 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 POU2AF1Q16633 256 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 DEFB115Q30KQ5 88 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SLC25A52Q3SY17 297 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM176BQ3YBM2 270 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 PARP15Q460N3 678 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TP53I3Q53FA7 332 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SOHLH1Q5JUK2 328 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ACTL10Q5JWF8 245 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CCNJQ5T5M9 372 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 LPCAT4Q643R3 524 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NIPAL1Q6NVV3 410 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SPESP1Q6UW49 350 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 C5orf46Q6UWT4 87 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 Q6ZN92 141 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SLC25A48Q6ZT89 311 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SSX7Q7RTT5 188 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NT5DC3Q86UY8 548 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TRAPPC5Q8IUR0 188 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 WDFY1Q8IWB7 410 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 UBALD2Q8IYN6 164 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 OR2L13Q8N349 312 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 DHRSXQ8N5I4 330 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 LRRC52Q8N7C0 313 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 PXT1Q8NFP0 134 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 VN1R2Q8NFZ6 395 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 OR11L1Q8NGX0 322 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 OR5W2Q8NH69 310 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 OR5AK3PQ8NH89 298 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 BORCS5Q969J3 196 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CREB3L1Q96BA8 519 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 FLYWCH2Q96CP2 140 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CMTM7Q96FZ5 175 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CNN2Q99439 309 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 FOXC2Q99958 501 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 MICU1Q9BPX6 476 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 HOPXQ9BPY8 73 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SEC22CQ9BRL7 303 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 COPS4Q9BT78 406 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM109Q9BVC6 243 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TIPINQ9BVW5 301 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ULBP1Q9BZM6 244 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ACTR3CQ9C0K3 210 aaPredicted RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NAA50Q9GZZ1 169 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 TRABDQ9H4I3 376 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 C11orf49Q9H6J7 331 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NIPAL2Q9H841 368 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 POPDC2Q9HBU9 364 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 VCX3AQ9NNX9 186 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ISYNA1Q9NPH2 558 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 CTPS2Q9NRF8 586 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SLC2A9Q9NRM0 540 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 DDX19AQ9NUU7 478 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 GUCA1BQ9UMX6 200 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SLC17A4Q9Y2C5 497 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 YARS2Q9Y2Z4 477 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 FAM32AQ9Y421 112 aaKnown RBP1.4□□□□□ -2.19
TRAV40-201ENST00000390467 OR51B4Q9Y5P0 310 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ARL5AQ9Y689 179 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SLC22A7Q9Y694 548 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 SAR1BQ9Y6B6 198 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 PTPRGP23470 1445 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NUP160Q12769 1436 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ABCB11O95342 1321 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 NRCAMQ92823 1304 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 PCDH11XQ9BZA7 1347 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF532Q9HCE3 1301 aa1.4□□□□□ -2.19
TRAV40-201ENST00000390467 DOCK8Q8NF50 2099 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PBRM1Q86U86 1689 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 NUP155O75694 1391 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 RFX7Q2KHR2 1363 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 KIAA0232Q92628 1395 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 USP47Q96K76 1375 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 A0A0B4J2E0 115 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GV72 72 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GX12 115 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CCDC182A6NF36 153 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TVP23AA6NH52 213 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 LINC00587B1AMM8 73 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DISC1C4P0D8 188 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 F5H768 121 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 F8W036 122 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms