RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 THYN1Q9P016 225 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 NGFP01138 241 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 IGHA1P01876 353 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 IGHA2P01877 340 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 OR4A8P0C604 315 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CD22P20273 847 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 WNT3P56703 355 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 IGFBP7Q16270 282 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 HLA-DRB5Q30154 266 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 ARL17AQ8IVW1 177 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 LINC00469Q8N7U9 141 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 ACER3Q9NUN7 267 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 TBC1D29Q9UFV1 150 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 AMMECR1Q9Y4X0 333 aaPredicted RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 A0A1W2PR48 441 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 H0Y8X5 98 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 MRGPREQ86SM8 312 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 OR2D2Q9H210 308 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 SH2D2AQ9NP31 389 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 ERRFI1Q9UJM3 462 aaPredicted RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 NAV1Q8NEY1 1877 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 DSCR3O14972 297 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 NMUP48645 174 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 DIO1P49895 249 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CTU2Q2VPK5 515 aaKnown RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 TMEM128Q5BJH2 165 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 ZNF343Q6P1L6 599 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 TMEM229BQ8NBD8 167 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 OR11G2Q8NGC1 345 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 DERL3Q96Q80 235 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 TECRQ9NZ01 308 aaKnown RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 TREM2Q9NZC2 230 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 VSIG4Q9Y279 399 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 PHRF1Q9P1Y6 1649 aaKnown RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 VIRMAQ69YN4 1812 aaKnown RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 DHRS7CA6NNS2 312 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CLDN34H7C241 214 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CORTO00230 105 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 APELAP0DMC3 54 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 VEGFBP49765 207 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 CEACAM16Q2WEN9 425 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 PHOSPHO2Q8TCD6 241 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 GPR61Q9BZJ8 451 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 UBR1Q8IWV7 1749 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 ARHGEF28Q8N1W1 1705 aaKnown RBP5.27□□□□□ -1.57
RFX3-204ENST00000382004 SPEF2Q9C093 1822 aa5.27□□□□□ -1.57
RFX3-204ENST00000382004 TTC3P53804 2025 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 XRN1Q8IZH2 1706 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 C3orf80F5H4A9 247 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SLC6A1P30531 599 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 RIGQ13278 110 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OTUD1Q5VV17 481 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR4C3Q8NH37 302 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MBNL1Q9NR56 388 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 LOXL2Q9Y4K0 774 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 EVPLQ92817 2033 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TMEM202A6NGA9 273 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 KLK10O43240 276 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SNRNP200O75643 2136 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 ZNF25P17030 456 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 UBE2L3P68036 154 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 PRSS8Q16651 343 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 LINC00303Q3SY05 128 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR10G4Q8NGN3 311 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR10G9Q8NGN4 311 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR10G7Q8NGN6 311 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 RABAC1Q9UI14 185 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MMP17Q9ULZ9 603 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 DAPP1Q9UN19 280 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 HS3ST3A1Q9Y663 406 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MBLAC1A4D2B0 266 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 MBTPS2O43462 519 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TCF21O43680 179 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ZNF253O75346 499 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 CA6P23280 308 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 EVX1P49640 407 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 GP2P55259 537 aaKnown RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 CD226Q15762 336 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SLC25A35Q3KQZ1 300 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 OR2G2Q8NGZ5 317 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MS4A6EQ96DS6 147 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 IP6K3Q96PC2 410 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SLC35B3Q9H1N7 401 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 PAM16Q9Y3D7 125 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 MRC1P22897 1456 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 PPLO60437 1756 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SHISA8B8ZZ34 492 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 P01737 135 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 ACAA1P09110 424 aaPredicted RBP5.26□□□□□ -1.57
RFX3-204ENST00000382004 DUSP8Q13202 625 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 RTP5Q14D33 572 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 PNLIPRP3Q17RR3 467 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 IGSF11Q5DX21 431 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TTC32Q5I0X7 151 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 TMEM215Q68D42 235 aa5.26□□□□□ -1.57
RFX3-204ENST00000382004 SLC16A13Q7RTY0 426 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms