RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 ZNF627Q7L945 461 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 STEAP2Q8NFT2 490 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 THRSPQ92748 146 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 NKX3-1Q99801 234 aaPredicted RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 GAL3ST1Q99999 423 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 G6PC2Q9NQR9 355 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 ZNF230Q9UIE0 474 aaPredicted RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 OR52A1Q9UKL2 312 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PROCRQ9UNN8 238 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 TIMM10BQ9Y5J6 103 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 POLEQ07864 2286 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 LYZL6O75951 148 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PLATP00750 562 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 DBHP09172 617 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 CD79AP11912 226 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 EDN3P14138 238 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 IGHV1-2P23083 117 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 SLC6A9P48067 706 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 CX3CR1P49238 355 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 MMP16P51512 607 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 FGL1Q08830 312 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PMPCAQ10713 525 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 HIKESHIQ53FT3 197 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 FAM74A1Q5RGS3 127 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 LY6G6FQ5SQ64 297 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 CLVS2Q5SYC1 327 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 Q6ZT83 130 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 OR1K1Q8NGR3 316 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 SLC25A21Q9BQT8 299 aaPredicted RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 OR2H1Q9GZK4 316 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 SLC17A5Q9NRA2 495 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PLSCR4Q9NRQ2 329 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 FAM206AQ9NX38 181 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 TAS2R3Q9NYW6 316 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 USP24Q9UPU5 2620 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PRR14LQ5THK1 2151 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 KANTRA0A1W2PQU2 76 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 M0QYG6 137 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 SIGLEC5O15389 551 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 KALRNO60229 2985 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 RAD51DO75771 328 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 AMY2AP04746 511 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 MMP7P09237 267 aaPredicted RBP10.79□□□□□ -0.68
CIITA-202ENST00000381835 GLI4P10075 376 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 CFPP27918 469 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 ZNF121P58317 390 aaPredicted RBP10.79□□□□□ -0.68
CIITA-202ENST00000381835 RAB35Q15286 201 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 PCSK4Q6UW60 755 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 TMEM229BQ8NBD8 167 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 SEH1LQ96EE3 360 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 LRRC46Q96FV0 321 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 WNT5BQ9H1J7 359 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 RASL12Q9NYN1 266 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 OR5H14A6NHG9 310 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 DNASE2O00115 360 aaPredicted RBP10.79□□□□□ -0.68
CIITA-202ENST00000381835 SYNGR3O43761 229 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 CRHP06850 196 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 MELTFP08582 738 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 HTR5AP47898 357 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 TGFBR3Q03167 851 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 TSC22D1Q15714 1073 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 PABPC1L2AQ5JQF8 200 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 ELP2Q6IA86 826 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 NAA40Q86UY6 237 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 OR1F12Q8NHA8 337 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 PDCD10Q9BUL8 212 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 PBOV1Q9GZY1 135 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 PCDHB16Q9NRJ7 776 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 DHDHQ9UQ10 334 aa10.79□□□□□ -0.68
CIITA-202ENST00000381835 SULT1C2O00338 296 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 CNOT4O95628 575 aaKnown RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 CGAP01215 116 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 CBX5P45973 191 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 RSPO1Q2MKA7 263 aaPredicted RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 GLT8D1Q68CQ7 371 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 LIN54Q6MZP7 749 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 FAM57BQ71RH2 274 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 TMEM17Q86X19 198 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 OR1J2Q8NGS2 313 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 BCL2L2Q92843 193 aaPredicted RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 SPTSSAQ969W0 71 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 TINAGL1Q9GZM7 467 aaPredicted RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 DNTTIP1Q9H147 329 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 COMMD9Q9P000 198 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 CKLFQ9UBR5 152 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 RELNP78509 3460 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 M0R135 149 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 P2RY10O00398 339 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 CD8AP01732 235 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 RAB3AP20336 220 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 ANOS1P23352 680 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms