RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 PPIAL4DF5H284 164 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
PDGFB-202ENST00000381551 FSTL3O95633 263 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 MAS1P04201 325 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 PPIAL4FP0DN26 164 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 SLC25A16P16260 332 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 ALDH3B2P48448 385 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
PDGFB-202ENST00000381551 IL24Q13007 206 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 PDZK1IP1Q13113 114 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 AVPI1Q5T686 147 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 LRRTM1Q86UE6 522 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 LRRC28Q86X40 367 aaPredicted RBP12.99□□□□□ -0.33
PDGFB-202ENST00000381551 LYPD6Q86Y78 171 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 CDH26Q8IXH8 852 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 TIMD4Q96H15 378 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 TMEM165Q9HC07 324 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 TCF7L1Q9HCS4 588 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 PPIAL4AQ9Y536 164 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 OTOGQ6ZRI0 2925 aa12.99□□□□□ -0.33
PDGFB-202ENST00000381551 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.98□□□□□ -0.33
PDGFB-202ENST00000381551 AKR7A2O43488 359 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ZNF205O95201 554 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 CD37P11049 281 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 EGR1P18146 543 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ADRA2CP18825 462 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 GADD45AP24522 165 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ZNF93P35789 620 aaPredicted RBP12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ZP1P60852 638 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 BTG1P62324 171 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 ZMYND11Q15326 602 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 DDI2Q5TDH0 399 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 BOLLQ8N9W6 283 aaKnown RBP12.98□□□□□ -0.33
PDGFB-202ENST00000381551 RFT1Q96AA3 541 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 SNTG1Q9NSN8 517 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 TXNL4BQ9NX01 149 aaKnown RBP12.98□□□□□ -0.33
PDGFB-202ENST00000381551 SSR3Q9UNL2 185 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 POLDIP2Q9Y2S7 368 aa12.98□□□□□ -0.33
PDGFB-202ENST00000381551 TRAV1-2A0A0B4J238 106 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 WNT9BO14905 357 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 SPRY1O43609 319 aaPredicted RBP12.97□□□□□ -0.33
PDGFB-202ENST00000381551 PLATP00750 562 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 SFRP4Q6FHJ7 346 aaPredicted RBP12.97□□□□□ -0.33
PDGFB-202ENST00000381551 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 SPNS3Q6ZMD2 512 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 MKXQ8IYA7 352 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 ZSCAN4Q8NAM6 433 aaPredicted RBP12.97□□□□□ -0.33
PDGFB-202ENST00000381551 POC1AQ8NBT0 407 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 OR51F2Q8NH61 342 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 CPNE2Q96FN4 548 aaPredicted RBP12.97□□□□□ -0.33
PDGFB-202ENST00000381551 ZNF488Q96MN9 340 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 CHCHD6Q9BRQ6 235 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 SLITRK2Q9H156 845 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 EXOSC4Q9NPD3 245 aaKnown RBP12.97□□□□□ -0.33
PDGFB-202ENST00000381551 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
PDGFB-202ENST00000381551 CREBBPQ92793 2442 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 A0A096LNT2 108 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 IGKV1-12A0A0C4DH73 117 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 SHISA3A0PJX4 238 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 OOEPA6NGQ2 149 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 F8VVB4 439 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 F8VWA3 439 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 LGALS8O00214 317 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.33
PDGFB-202ENST00000381551 ANGPTL7O43827 346 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 IGKV1D-12P01611 117 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 TMEM225BP0DP42 221 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 GLRA1P23415 457 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 MDH2P40926 338 aaKnown RBP12.96□□□□□ -0.33
PDGFB-202ENST00000381551 PTGFRP43088 359 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 POU3F4P49335 361 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 ASCL4Q6XD76 172 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 SAXO1Q8IYX7 474 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 DEFB108BQ8NET1 73 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 GPER1Q99527 375 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 NKX3-1Q99801 234 aaPredicted RBP12.96□□□□□ -0.33
PDGFB-202ENST00000381551 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
PDGFB-202ENST00000381551 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms