RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 KCTD18Q6PI47 426 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-203ENST00000380748 OR2W3Q7Z3T1 314 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 FAM86B1Q8N7N1 296 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 AKR1E2Q96JD6 320 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 RCHY1Q96PM5 261 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 DUX3Q96PT4 197 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 OR8B4Q96RC9 309 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 SLC25A33Q9BSK2 321 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 ABHD6Q9BV23 337 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 PALMDQ9NP74 551 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 DSCAML1Q8TD84 2053 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 H3BUI4 141 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 NME4O00746 187 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 RBP4P02753 201 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 PGA5P0DJD9 388 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 MYCNOSP40205 109 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 OPRL1P41146 370 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 ACTA2P62736 377 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 ACTG2P63267 376 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 ACTC1P68032 377 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 ACTA1P68133 377 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 MAPRE2Q15555 327 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 CEACAM21Q3KPI0 293 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 ZNF329Q86UD4 541 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 POC1AQ8NBT0 407 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 OR6K6Q8NGW6 343 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 RCN3Q96D15 328 aa13.75□□□□□ -0.21
HMGN1-203ENST00000380748 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 NUDT19A8MXV4 375 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 GADD45GO95257 159 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 SPI1P17947 270 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 CHATP28329 748 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 CRMP1Q14194 572 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 KRT72Q14CN4 511 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 C9orf152Q5JTZ5 239 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 ZFAND6Q6FIF0 208 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 TCF23Q7RTU1 214 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 BATF2Q8N1L9 274 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 OR6N2Q8NGY6 317 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 OR14J1Q9UGF5 321 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 AP3M1Q9Y2T2 418 aa13.74□□□□□ -0.21
HMGN1-203ENST00000380748 IGHV2-26A0A0B4J1V2 119 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
HMGN1-203ENST00000380748 ECI1P42126 302 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 RAB25P57735 213 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 TSPAN31Q12999 210 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 ARPINQ7Z6K5 226 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 KLHL30-AS1Q8NEE0 82 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 OR8B12Q8NGG6 310 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 OR8D4Q8NGM9 314 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 NMNAT2Q9BZQ4 307 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 MYLK2Q9H1R3 596 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 CDH10Q9Y6N8 788 aa13.73□□□□□ -0.21
HMGN1-203ENST00000380748 OR2F2O95006 317 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 SNRNP70P08621 437 aaKnown RBP13.72□□□□□ -0.21
HMGN1-203ENST00000380748 H2BFMP0C1H6 154 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 EDDM3BP56851 147 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 IL18R1Q13478 541 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 LINC01590Q5TEZ4 76 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 ERI1Q8IV48 349 aaKnown RBP13.72□□□□□ -0.21
HMGN1-203ENST00000380748 FAM81AQ8TBF8 368 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 GNPDA2Q8TDQ7 276 aa13.72□□□□□ -0.21
HMGN1-203ENST00000380748 RBM14Q96PK6 669 aaKnown RBP13.72□□□□□ -0.21
HMGN1-203ENST00000380748 OR5B21A6NL26 309 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 K7N7A8 449 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 NXPH2O95156 264 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 HTR1DP28221 377 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 OR3A4PP47883 348 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 SMIM11AP58511 58 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 MOB3CQ70IA8 216 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 MEPCEQ7L2J0 689 aaKnown RBP13.71□□□□□ -0.21
HMGN1-203ENST00000380748 ZNF676Q8N7Q3 588 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 ASCC1Q8N9N2 400 aaKnown RBP13.71□□□□□ -0.21
HMGN1-203ENST00000380748 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 OR4P4Q8NGL7 312 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 STMN2Q93045 179 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 ZNF714Q96N38 554 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 INTS14Q96SY0 518 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 CLEC7AQ9BXN2 247 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 VIPAS39Q9H9C1 493 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.21
HMGN1-203ENST00000380748 SESN1Q9Y6P5 492 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 V9GYQ6 96 aa13.71□□□□□ -0.21
HMGN1-203ENST00000380748 IFNGR2P38484 337 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 SF3A3Q12874 501 aaKnown RBP eCLIP13.7□□□□□ -0.226e-7■□□□□ 11.3
HMGN1-203ENST00000380748 PLCXD3Q63HM9 321 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 KRT74Q7RTS7 529 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 SBSPONQ8IVN8 264 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 RAX2Q96IS3 184 aa13.7□□□□□ -0.22
HMGN1-203ENST00000380748 NOL4LQ96MY1 436 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-203ENST00000380748 NRIP2Q9BQI9 281 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms