RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SNU13P55769 128 aaKnown RBP20.02■□□□□ 0.8
VPS16-201ENST00000380443 IL13RA1P78552 427 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 SURF2Q15527 256 aaPredicted RBP20.02■□□□□ 0.8
VPS16-201ENST00000380443 MOB3CQ70IA8 216 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 ELMOD3Q96FG2 381 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 DEFB127Q9H1M4 99 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 GPR132Q9UNW8 380 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 IGKV1-27A0A075B6S5 117 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 SLC22A20A6NK97 555 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 RFPL4AA6NLU0 287 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 RFPL4AL1F8VTS6 287 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 RRP8O43159 456 aaKnown RBP20.02■□□□□ 0.79
VPS16-201ENST00000380443 MPGP29372 298 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 PDZK1IP1Q13113 114 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 CAMK2BQ13554 666 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 PLCXD3Q63HM9 321 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 LHFPL1Q86WI0 220 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 CSNK2A3Q8NEV1 391 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 OR5AP2Q8NGF4 316 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 NANOS1Q8WY41 292 aaKnown RBP20.02■□□□□ 0.79
VPS16-201ENST00000380443 DPCDQ9BVM2 203 aaPredicted RBP20.02■□□□□ 0.79
VPS16-201ENST00000380443 LIPGQ9Y5X9 500 aa20.02■□□□□ 0.79
VPS16-201ENST00000380443 LOC100509620A0A075B734 347 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 A0A0B4J2A0 478 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 TUBAL3A6NHL2 446 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 DTYMKP23919 212 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 PMELP40967 661 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 PPP1R1AQ13522 171 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 TMEM128Q5BJH2 165 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 DMRTC1Q5HYR2 192 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 LY6G6FQ5SQ64 297 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 DCAF12L2Q5VW00 463 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 NUFIP2Q7Z417 695 aaKnown RBP20.01■□□□□ 0.79
VPS16-201ENST00000380443 PEG10Q86TG7 708 aaKnown RBP20.01■□□□□ 0.79
VPS16-201ENST00000380443 RTN4RL2Q86UN3 420 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 ST6GALNAC5Q9BVH7 336 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 UBQLN2Q9UHD9 624 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 SHPKQ9UHJ6 478 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 MAB21L2Q9Y586 359 aa20.01■□□□□ 0.79
VPS16-201ENST00000380443 PRSS44E7EML9 344 aa20■□□□□ 0.79
VPS16-201ENST00000380443 IGHG3P01860 377 aa20■□□□□ 0.79
VPS16-201ENST00000380443 CXCL2P19875 107 aa20■□□□□ 0.79
VPS16-201ENST00000380443 SSTR2P30874 369 aa20■□□□□ 0.79
VPS16-201ENST00000380443 RAB1AP62820 205 aa20■□□□□ 0.79
VPS16-201ENST00000380443 FBXW9Q5XUX1 488 aa20■□□□□ 0.79
VPS16-201ENST00000380443 TMEM65Q6PI78 240 aa20■□□□□ 0.79
VPS16-201ENST00000380443 PIGCQ92535 297 aa20■□□□□ 0.79
VPS16-201ENST00000380443 EMG1Q92979 244 aaKnown RBP20■□□□□ 0.79
VPS16-201ENST00000380443 PPA2Q9H2U2 334 aa20■□□□□ 0.79
VPS16-201ENST00000380443 SPRR3Q9UBC9 169 aa20■□□□□ 0.79
VPS16-201ENST00000380443 A0A096LPE4 126 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 A0A1W2PPZ6 126 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 CST4P01036 141 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 HLA-HP01893 362 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 GABRR1P24046 479 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 S100A11P31949 105 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 CHRFAM7AQ494W8 412 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 SAXO1Q8IYX7 474 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 OSR2Q8N2R0 312 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 MARCH1Q8TCQ1 289 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 GMPPAQ96IJ6 420 aaPredicted RBP19.99■□□□□ 0.79
VPS16-201ENST00000380443 FIGNL2A6NMB9 653 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 NKX2-8O15522 239 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 TPD52L2O43399 206 aaKnown RBP19.99■□□□□ 0.79
VPS16-201ENST00000380443 SS18L1O75177 396 aaPredicted RBP19.99■□□□□ 0.79
VPS16-201ENST00000380443 MPC2O95563 127 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 CD79AP11912 226 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 RPA2P15927 270 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 PPP3CBP16298 524 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 C17orf107Q6ZR85 190 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 OVCH2Q7RTZ1 564 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 Q8NFD4 153 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 POM121L2Q96KW2 1035 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 OSGIN2Q9Y236 505 aa19.99■□□□□ 0.79
VPS16-201ENST00000380443 C5orf49A4QMS7 147 aa19.98■□□□□ 0.79
VPS16-201ENST00000380443 ANKRD34BA5PLL1 514 aa19.98■□□□□ 0.79
VPS16-201ENST00000380443 SPRY1O43609 319 aaPredicted RBP19.98■□□□□ 0.79
VPS16-201ENST00000380443 RNFT1Q5M7Z0 435 aa19.98■□□□□ 0.79
VPS16-201ENST00000380443 RPUSD3Q6P087 351 aaKnown RBP19.98■□□□□ 0.79
VPS16-201ENST00000380443 MRPL21Q7Z2W9 205 aaKnown RBP19.98■□□□□ 0.79
VPS16-201ENST00000380443 OR1K1Q8NGR3 316 aa19.98■□□□□ 0.79
VPS16-201ENST00000380443 COMMD9Q9P000 198 aa19.98■□□□□ 0.79
VPS16-201ENST00000380443 LINC00862A6NCI5 91 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A10PA6NDY2 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A18PA6NE21 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A16PA6NEW6 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A20PA6NIJ5 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A8PA6NJQ4 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A7PA6NKC0 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A22PA8MWA6 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A12PA8MX19 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A5PA8MXJ8 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A23PA8MXZ1 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 ANGPTL7O43827 346 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 NOS1APO75052 506 aaPredicted RBP19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A15PP0C7V4 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A13PP0C7W8 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A14PP0C7W9 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FAM90A24PP0C7X0 464 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 SLC25A4P12235 298 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms