RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 MOGAT1Q96PD6 335 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 E5RGE8 158 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 DIO1P49895 249 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ZNF774Q6NX45 483 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 Q6ZN92 141 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 LFNGQ8NES3 379 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 LILRB4Q8NHJ6 448 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 TMEM200CA6NKL6 621 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 OR5B21A6NL26 309 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 GSTZ1O43708 216 aaPredicted RBP11.13□□□□□ -0.63
CHD3-203ENST00000380358 KLHDC8BQ8IXV7 354 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 IL21Q9HBE4 155 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 M0R296 226 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 FCMRO60667 390 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 KLRB1Q12918 225 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 ZNF547Q8IVP9 402 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 D2HGDHQ8N465 521 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 RAB1CQ92928 201 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 IP6K3Q96PC2 410 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 SIGLEC11Q96RL6 698 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 HMGN4O00479 90 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 BTF3P20290 206 aaKnown RBP11.13□□□□□ -0.63
CHD3-203ENST00000380358 FMODQ06828 376 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 GABRG3Q99928 467 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 EMP1P54849 157 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 FOXO1Q12778 655 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 TMEM240Q5SV17 173 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 RND1Q92730 232 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 HS3ST2Q9Y278 367 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 PSMB6P28072 239 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 TBX15Q96SF7 602 aa11.13□□□□□ -0.63
CHD3-203ENST00000380358 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
CHD3-203ENST00000380358 RBFOX1Q9NWB1 397 aaKnown RBP11.13□□□□□ -0.63
CHD3-203ENST00000380358 DSCR4P56555 118 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 C21orf62-AS1Q17RA5 79 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 R4GMQ9 66 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 BCL3P20749 454 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 LGALSLQ3ZCW2 172 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 LYRM4Q9HD34 91 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 ADGRB2O60241 1585 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 TRAV17A0A0B4J275 112 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 EPXP11678 715 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 DCTDP32321 178 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 KCNMB1Q16558 191 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 GCSAMLQ5JQS6 135 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 MOGAT3Q86VF5 341 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 AURKAIP1Q9NWT8 199 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 OR4E1P0C645 316 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 TMEM215Q68D42 235 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 OR2A2Q6IF42 318 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 NOXO1Q8NFA2 376 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 SSMEM1Q8WWF3 244 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 ADAMTS5Q9UNA0 930 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 FAM27D1Q5T7N8 215 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 CGB2Q6NT52 195 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 DIMT1Q9UNQ2 313 aaKnown RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 EVPLQ92817 2033 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 MRC1P22897 1456 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 C7orf72A4D263 438 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 PF4P02776 101 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 TM4SF4P48230 202 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 SPCS3P61009 180 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 PRNTQ86SH4 94 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 FAM219AQ8IW50 185 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 OR8I2Q8N0Y5 310 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 MORN4Q8NDC4 146 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 SOSTQ9BQB4 213 aa11.12□□□□□ -0.63
CHD3-203ENST00000380358 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
CHD3-203ENST00000380358 CRISP2P16562 243 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 CHCHD4Q8N4Q1 142 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 OR2G2Q8NGZ5 317 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 CSNK1G1Q9HCP0 422 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms