RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZBP1Q9H171 429 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 GDE1Q9NZC3 331 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 IGHA1P01876 353 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 IGHA2P01877 340 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 HPXP02790 462 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 JAG1P78504 1218 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 GPRIN1Q7Z2K8 1008 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 OR4C13Q8NGP0 309 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 OR4S2Q8NH73 311 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 KAZALD1Q96I82 304 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 AICDAQ9GZX7 198 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 MIXL1Q9H2W2 232 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 HSPB7Q9UBY9 170 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 TCRBV16S1A1N1A0A5B0 115 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 APOMO95445 188 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 TRGC1P0CF51 173 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 FUT7Q11130 342 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 MRPL58Q14197 206 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 PUSL1Q8N0Z8 303 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 CYB5D2Q8WUJ1 264 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ZC3HAV1LQ96H79 300 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 NPY6RQ99463 290 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 OCIAD1Q9NX40 245 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 GFRA2O00451 464 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 PEX10O60683 326 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 FTH1P19P0C7X4 201 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 PPIAP62937 165 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 TGIF2LYQ8IUE0 185 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 H1FOOQ8IZA3 346 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 SHDQ96IW2 340 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ZNF48Q96MX3 618 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 SLIRPQ9GZT3 109 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 ZNF107Q9UII5 783 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 SPATA31A1Q5TZJ5 1347 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ANKRD36A6QL64 1941 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 CD163L1Q9NR16 1453 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 F13BP05160 661 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 TMEM95Q3KNT9 176 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ETFBKMTQ8IXQ9 262 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 CD99L2Q8TCZ2 262 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 SVILO95425 2214 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 HRO43593 1189 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 RBPMS2Q6ZRY4 209 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 IGSF8Q969P0 613 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 FAM163AQ96GL9 167 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 EGLN2Q96KS0 407 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 APOBEC3GQ9HC16 384 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ADAMTS5Q9UNA0 930 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 KDM6BO15054 1643 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 FCARP24071 287 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 ACVRL1P37023 503 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 NAAAQ02083 359 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 SURF2Q15527 256 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 FBLN7Q53RD9 439 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 METTL27Q8N6F8 245 aaPredicted RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 SIRT6Q8N6T7 355 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 MRPS24Q96EL2 167 aaKnown RBP7.89□□□□□ -1.15
LIG3-202ENST00000378526 TMEM140Q9NV12 185 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 FBXL17Q9UF56 701 aa7.89□□□□□ -1.15
LIG3-202ENST00000378526 CDX4O14627 284 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 HOXA10P31260 410 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 FABP5Q01469 135 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ELAVL3Q14576 367 aaKnown RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 DUSP5Q16690 384 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SCAMP5Q8TAC9 235 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 RND1Q92730 232 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 RAB1CQ92928 201 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 MOB3AQ96BX8 217 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 GRAMD2BQ96HH9 432 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SLC25A22Q9H936 323 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 A8MWL6 223 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 GOSR1O95249 250 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 MPZL1O95297 269 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 KIR2DS3Q14952 304 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 TXNRD3NBQ6F5E7 133 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 NR2C2APQ86WQ0 139 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ROBO2Q9HCK4 1378 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 TRAV8-4A0A0B4J246 113 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 CD74P04233 296 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 RAB9AP51151 201 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SGMS2Q8NHU3 365 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 OR8B2Q96RD0 313 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 TMEM208Q9BTX3 173 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 CNTD2Q9H8S5 307 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SLCO3A1Q9UIG8 710 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ZBTB25P24278 435 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 C17orf67Q0P5P2 114 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 STAC2Q6ZMT1 411 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 RGP1Q92546 391 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 THYN1Q9P016 225 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 IFT172Q9UG01 1749 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ACOT8O14734 319 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SLC19A1P41440 591 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms