RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CXXC4Q9H2H0 198 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
TRIM13-202ENST00000378182 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 RPS19P39019 145 aaKnown RBP12.61□□□□□ -0.39
TRIM13-202ENST00000378182 DHRS4L2Q6PKH6 230 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 LHX9Q9NQ69 397 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 ACER3Q9NUN7 267 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 ERRFI1Q9UJM3 462 aaPredicted RBP12.61□□□□□ -0.39
TRIM13-202ENST00000378182 KCNE3Q9Y6H6 103 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 SERPINE3A8MV23 424 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 UBE2L6O14933 153 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 ETHE1O95571 254 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 ZFAND2BQ8WV99 257 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 CMC2Q9NRP2 79 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 SIRT3Q9NTG7 399 aaPredicted RBP12.61□□□□□ -0.39
TRIM13-202ENST00000378182 NDUFB11Q9NX14 153 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 SP1P08047 785 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 hADV38S2A0JD32 116 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 MED19A0JLT2 244 aaPredicted RBP12.6□□□□□ -0.39
TRIM13-202ENST00000378182 CCL4P13236 92 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 ZNF32P17041 273 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 COL9A1P20849 921 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 ACP1P24666 158 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 SIRT5Q9NXA8 310 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 CACNA1CQ13936 2221 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 ETFRF1Q6IPR1 90 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 NHLH1Q02575 133 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 NHLH2Q02577 135 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 SLC25A30Q5SVS4 291 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 FADS6Q8N9I5 356 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
TRIM13-202ENST00000378182 MRPS18BQ9Y676 258 aaKnown RBP12.6□□□□□ -0.39
TRIM13-202ENST00000378182 E5RGE8 158 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 CGB2Q6NT52 195 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 ZNF596Q8TC21 504 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 B9D1Q9UPM9 204 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 LAMP3Q9UQV4 416 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 NSG2Q9Y328 171 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 FABP4P15090 132 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 NCR3LG1Q68D85 454 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 THYN1Q9P016 225 aa12.6□□□□□ -0.39
TRIM13-202ENST00000378182 LPAR6P43657 344 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 OR2B8PP59922 312 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
TRIM13-202ENST00000378182 STAC2Q6ZMT1 411 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 ATP5SQ99766 215 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 SLC2A9Q9NRM0 540 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 PPP1R2P9O14990 202 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 CD3DP04234 171 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 THBS4P35443 961 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 CCR9P51686 369 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 KLHDC8BQ8IXV7 354 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 FGF2P09038 288 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 CALCRP30988 508 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 OR5H6Q8NGV6 325 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 ACTL6AO96019 429 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 CD80P33681 288 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 A0A1W2PPQ1 181 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 LILRA5A6NI73 299 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 CGB1A6NKQ9 187 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 OR5AL1P0C617 328 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 RPL30P62888 115 aaKnown RBP12.59□□□□□ -0.39
TRIM13-202ENST00000378182 RELAQ04206 551 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 MAVSQ7Z434 540 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 SLC51BQ86UW2 128 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
TRIM13-202ENST00000378182 RHBDL1O75783 438 aa12.58□□□□□ -0.39
TRIM13-202ENST00000378182 LHX8Q68G74 356 aa12.58□□□□□ -0.39
TRIM13-202ENST00000378182 TMEM102Q8N9M5 508 aaPredicted RBP12.58□□□□□ -0.39
TRIM13-202ENST00000378182 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.39
TRIM13-202ENST00000378182 P2RX4Q99571 388 aa12.58□□□□□ -0.39
TRIM13-202ENST00000378182 DOK1Q99704 481 aa12.58□□□□□ -0.39
TRIM13-202ENST00000378182 RBFOX1Q9NWB1 397 aaKnown RBP12.58□□□□□ -0.39
TRIM13-202ENST00000378182 HILPDAQ9Y5L2 63 aa12.58□□□□□ -0.39
TRIM13-202ENST00000378182 A0A1W2PN81 502 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 GFRA3O60609 400 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 JTBO76095 146 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 CHRNA7P36544 502 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 PTGFRP43088 359 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 VAMP3Q15836 100 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 MYPOPQ86VE0 399 aaPredicted RBP12.58□□□□□ -0.4
TRIM13-202ENST00000378182 SLC25A46Q96AG3 418 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 JAM3Q9BX67 310 aa12.58□□□□□ -0.4
TRIM13-202ENST00000378182 ASB1Q9Y576 335 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms