RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SPRY1O43609 319 aaPredicted RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 IFNA2P01563 188 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 SERPINA5P05154 406 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 KLK3P07288 261 aaPredicted RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 SFTPBP07988 381 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 TMEM225BP0DP42 221 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 RRADP55042 308 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 B3GALT5-AS1P59052 145 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 TAF9Q16594 264 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 PMS2CLQ68D20 193 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 RPL7L1Q6DKI1 246 aaKnown RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 RPS19BP1Q86WX3 136 aaKnown RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 AGBL5Q8NDL9 886 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 M1APQ8TC57 530 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 ARL11Q969Q4 196 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 SPTSSAQ969W0 71 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 ZNF205O95201 554 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 PATE4P0C8F1 98 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 HKR1P10072 659 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 MLF1P58340 268 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 S100A10P60903 97 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 PPA1Q15181 289 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 OR2A2Q6IF42 318 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 ZNF774Q6NX45 483 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 TMEM88Q6PEY1 159 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 FOXRED2Q8IWF2 684 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 TMEM156Q8N614 296 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 MMP26Q9NRE1 261 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 ZNF629Q9UEG4 869 aaPredicted RBP9.52□□□□□ -0.89
BEST1-201ENST00000378043 ANXA10Q9UJ72 324 aa9.52□□□□□ -0.89
BEST1-201ENST00000378043 FREM1Q5H8C1 2179 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 DOCK10Q96BY6 2186 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CCDC187A0A096LP49 1063 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 SGCEO43556 437 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CBR3O75828 277 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 TSPAN9O75954 239 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 APOC1P02654 83 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 H2AFB1P0C5Y9 115 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 RCC1P18754 421 aaPredicted RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 ARL6IP1Q15041 203 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 OR2Y1Q8NGV0 311 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 HLA-CQ95604 372 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 INTS12Q96CB8 462 aaKnown RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CNTNAP3BQ96NU0 1288 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CNTNAP3Q9BZ76 1288 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CRLF2Q9HC73 371 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 PCDHB16Q9NRJ7 776 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 HPF1Q9NWY4 346 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 AK3Q9UIJ7 227 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 C14orf166Q9Y224 244 aaKnown RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 FAM230AA0A1W2PPH8 454 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CRYM-AS1A6NIL9 109 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 NTN3O00634 580 aaPredicted RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 OPRM1P35372 400 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 SCRN3Q0VDG4 424 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CHAF1BQ13112 559 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 RAB35Q15286 201 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 SVBPQ8N300 66 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 GPR137CQ8N3F9 429 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 SPSB1Q96BD6 273 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 REEP6Q96HR9 211 aa9.51□□□□□ -0.89
BEST1-201ENST00000378043 CARHSP1Q9Y2V2 147 aaKnown RBP9.51□□□□□ -0.89
BEST1-201ENST00000378043 IGKV1-12A0A0C4DH73 117 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 ZNF716A6NP11 495 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 LRP3O75074 770 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 IGKV1D-12P01611 117 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 CTSDP07339 412 aaPredicted RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 PET100P0DJ07 73 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 OR5H8P0DN80 308 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 LPAR6P43657 344 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 RAC3P60763 192 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 ZFP36L1Q07352 338 aaKnown RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 PJVKQ0ZLH3 352 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 RTL6Q6ICC9 239 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 BRICD5Q6PL45 260 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 PLXDC2Q6UX71 529 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 YRDCQ86U90 279 aaKnown RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 GGNQ86UU5 652 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 DYRK2Q92630 601 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 MRPL24Q96A35 216 aaKnown RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 SULT4A1Q9BR01 284 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 TMEM38BQ9NVV0 291 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 C1orf123Q9NWV4 160 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 FAM96BQ9Y3D0 163 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 NSG1A0A0A6YYJ2 146 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 PATE3B3GLJ2 98 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 F8W036 122 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 RFPL3SP0C7P2 107 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 B4GALT1P15291 398 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 ZNF32P17041 273 aa9.5□□□□□ -0.89
BEST1-201ENST00000378043 RBMXP38159 391 aaKnown RBP9.5□□□□□ -0.89
BEST1-201ENST00000378043 BLOC1S1P78537 153 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms