RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ST7LQ8TDW4 575 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 RNF133Q8WVZ7 376 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 MUCL1Q96DR8 90 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 GFI1Q99684 422 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 KCNJ15Q99712 375 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 WDR54Q9H977 334 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ARHGAP21Q5T5U3 1957 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 K7EM74 188 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 LGALS8O00214 317 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 TO15178 435 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 TPPPO94811 219 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 CSF1P09603 554 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 THBS2P35442 1172 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 PTGDSP41222 190 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 FOXF2Q12947 444 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 MRPL49Q13405 166 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF239Q16600 458 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 DCAF12L2Q5VW00 463 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 THOC7Q6I9Y2 204 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ADAD2Q8NCV1 583 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SLC30A7Q8NEW0 376 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 OR11H7Q8NGC8 314 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 H1FXQ92522 213 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF649Q9BS31 505 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 HAO2Q9NYQ3 351 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 KCNK7Q9Y2U2 307 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 A0A0G2JK05 382 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 KANTRA0A1W2PQU2 76 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SMCO3A2RU48 225 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SYNGR1O43759 233 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 GLSO94925 669 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SNRPCP09234 159 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 OR8U9P0C7N5 309 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 APELAP0DMC3 54 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 PTGS2P35354 604 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 LUMP51884 338 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 CCL8P80075 99 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 EFNB1P98172 346 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 PPP1R1AQ13522 171 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 OR8B8Q15620 311 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 RNLSQ5VYX0 342 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 BPHLQ86WA6 291 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 OR8U1Q8NH10 309 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ST6GAL2Q96JF0 529 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ANGPTL4Q9BY76 406 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 NMNAT2Q9BZQ4 307 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 KLK13Q9UKR3 277 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 DYSFO75923 2080 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 MKRN2OSH3BPM6 223 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 SSX5O60225 188 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 GFRA3O60609 400 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 SC5DO75845 299 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 IGHEP01854 428 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 NAGAP17050 411 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 MMP15P51511 669 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 GRB2P62993 217 aaKnown RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 C5orf46Q6UWT4 87 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 OR10R2Q8NGX6 335 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 MEIKINA0A087WXM9 373 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LRRC3CA6NJW4 275 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 XRCC3O43542 346 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 OR4E1P0C645 316 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 OR5H8P0DN80 308 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 M6PRP20645 277 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 CPT2P23786 658 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ACP1P24666 158 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 SERPINF1P36955 418 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PRDX4Q13162 271 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PRR30Q53SZ7 412 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 METTL11BQ5VVY1 283 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF441Q8N8Z8 693 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 CPEB3Q8NE35 698 aaKnown RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 TMEM185AQ8NFB2 350 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 OR11L1Q8NGX0 322 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PSD2Q9BQI7 771 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 GNG12Q9UBI6 72 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LRBAP50851 2863 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 TRAV17A0A0B4J275 112 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LILRA1O75019 489 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LPLP06858 475 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 IL2RGP31785 369 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 GSK3AP49840 483 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LIMK1P53667 647 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 SUMO3P55854 103 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PCBD1P61457 104 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 FAM27E3Q08E93 113 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 LY6DQ14210 128 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 IAH1Q2TAA2 248 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PLA1AQ53H76 456 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ADAM5Q6NVV9 412 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ASCL5Q7RTU5 278 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 EXD3Q8N9H8 876 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF610Q8N9Z0 462 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 OR56B1Q8NGI3 324 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 NINJ1Q92982 152 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms