RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 BET1O15155 118 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 NR2C1P13056 603 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 FPR2P25090 351 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 NFYBP25208 207 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 PPT1P50897 306 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
USP11-204ENST00000377107 FAM76BQ5HYJ3 339 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 NAT6Q93015 286 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 ZNF845Q96IR2 970 aaPredicted RBP11.31□□□□□ -0.6
USP11-204ENST00000377107 C1orf147Q96MC9 270 aaPredicted RBP11.31□□□□□ -0.6
USP11-204ENST00000377107 PAPOLGQ9BWT3 736 aaKnown RBP11.31□□□□□ -0.6
USP11-204ENST00000377107 TLNRD1Q9H1K6 362 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 GLS2Q9UI32 602 aa11.31□□□□□ -0.6
USP11-204ENST00000377107 K7ESF4 209 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 TNFSF12O43508 249 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 IL2RAP01589 272 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 LYPD6Q86Y78 171 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 C2orf50Q96LR7 162 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 PCED1AQ9H1Q7 454 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 TMEM218A2RU14 115 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 NME2P1O60361 137 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 RFPL3SP0C7P2 107 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 FCGR2CP31995 323 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 PTGER4P35408 488 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 OR6S1Q8NH40 331 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 BCL2L14Q9BZR8 327 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 P4HTMQ9NXG6 502 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 EIF1BO60739 113 aaKnown RBP11.3□□□□□ -0.6
USP11-204ENST00000377107 ATG12O94817 140 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 LIFP15018 202 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 PRKACAP17612 351 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 TBPP20226 339 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
USP11-204ENST00000377107 CALCRP30988 508 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 ZNF345Q14585 488 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 ACTBL2Q562R1 376 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 AADACL3Q5VUY0 350 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 TCEAL6Q6IPX3 200 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 SVBPQ8N300 66 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 OR11L1Q8NGX0 322 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 PISDQ9UG56 409 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 AK3Q9UIJ7 227 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
USP11-204ENST00000377107 ZIC3O60481 467 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 UMODP07911 640 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 ICAM2P13598 275 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 FAM189A2Q15884 450 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 NRASP01111 189 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 PET100P0DJ07 73 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 CFPP27918 469 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 DSCR4P56555 118 aaPredicted RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 HERV-K104P61576 105 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 TFAP2EQ6VUC0 442 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 CALHM2Q9HA72 323 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 C1orf123Q9NWV4 160 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 M0R036 132 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 DNASE2O00115 360 aaPredicted RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 OR5AC1P0C628 307 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 CBX5P45973 191 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 RBP2P50120 134 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 CAV2P51636 162 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 STARD6P59095 220 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 CLINT1Q14677 625 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 GGNBP1Q5YKI7 109 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 PRSS54Q6PEW0 395 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 HAS2Q92819 552 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
USP11-204ENST00000377107 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 SLC7A11Q9UPY5 501 aa11.29□□□□□ -0.6
USP11-204ENST00000377107 ICE1Q9Y2F5 2266 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 IGHV1-45A0A0A0MS14 117 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 FAM166BA8MTA8 275 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 CD79AP11912 226 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 THBS4P35443 961 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 PNLIPRP3Q17RR3 467 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 LYZL2Q7Z4W2 148 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 PRR18Q8N4B5 295 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 SECTM1Q8WVN6 248 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 RTN4IP1Q8WWV3 396 aaPredicted RBP11.28□□□□□ -0.6
USP11-204ENST00000377107 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
USP11-204ENST00000377107 NPIPB4C9JG80 1138 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms