RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 DEFB126Q9BYW3 111 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 TUBD1Q9UJT1 453 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 SDK2Q58EX2 2172 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 LOC102725191A0A1B0GVB3 256 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 M0R135 149 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 MTRF1O75570 445 aaKnown RBP11.55□□□□□ -0.56
ACTN1-202ENST00000376839 CTSDP07339 412 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-202ENST00000376839 CD63P08962 238 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 TMEM225BP0DP42 221 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 OPRM1P35372 400 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-202ENST00000376839 AFF3P51826 1226 aaKnown RBP11.55□□□□□ -0.56
ACTN1-202ENST00000376839 F2RL1P55085 397 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 H3F3AP84243 136 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 GUSBP11Q6P575 273 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 DYRK2Q92630 601 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 ZNF799Q96GE5 643 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 Q96M66 194 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 FAAP24Q9BTP7 215 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 RBM24Q9BX46 236 aaKnown RBP11.55□□□□□ -0.56
ACTN1-202ENST00000376839 PCED1AQ9H1Q7 454 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 PARP11Q9NR21 331 aa11.55□□□□□ -0.56
ACTN1-202ENST00000376839 RRP8O43159 456 aaKnown RBP11.54□□□□□ -0.56
ACTN1-202ENST00000376839 PNLIPP16233 465 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 ACKR3P25106 362 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 CTAG1AP78358 180 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 EIF3IQ13347 325 aaKnown RBP11.54□□□□□ -0.56
ACTN1-202ENST00000376839 PEA15Q15121 130 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 TAF9Q16594 264 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 OR2AE1Q8NHA4 323 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 SECTM1Q8WVN6 248 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 ANXA10Q9UJ72 324 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 PADI1Q9ULC6 663 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 MTCH2Q9Y6C9 303 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 VPS13AQ96RL7 3174 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 SPRY1O43609 319 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-202ENST00000376839 OR5H8P0DN80 308 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 OTX1P32242 354 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-202ENST00000376839 EIF1P41567 113 aaKnown RBP11.54□□□□□ -0.56
ACTN1-202ENST00000376839 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 C10orf128Q5T292 105 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 C20orf196Q8IYI0 205 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 TMEM54Q969K7 222 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 PLEK2Q9NYT0 353 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 AK3Q9UIJ7 227 aa11.54□□□□□ -0.56
ACTN1-202ENST00000376839 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 G3V3Y1 287 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 GDF9O60383 454 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 CA11O75493 328 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 JTBO76095 146 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
ACTN1-202ENST00000376839 GLI4P10075 376 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 MTCP1P56278 107 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 PIGPP57054 158 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 SMCO1Q147U7 214 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 FBXO17Q96EF6 278 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 GNRHR2Q96P88 292 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 CACFD1Q9UGQ2 172 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 RARRES3Q9UL19 164 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 IFNA21P01568 189 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-202ENST00000376839 PPT1P50897 306 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 DVL1P1P54792 670 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-202ENST00000376839 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 TMEM123Q8N131 208 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 NAXEQ8NCW5 288 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
ACTN1-202ENST00000376839 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
ACTN1-202ENST00000376839 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 PQLC2LA1A4F0 135 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 DHHO43323 396 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 DIRAS3O95661 229 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 HIST1H3AP68431 136 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.56
ACTN1-202ENST00000376839 COL19A1Q14993 1142 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 ARL6IP1Q15041 203 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 HIST2H3PS2Q5TEC6 136 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 CDCP2Q5VXM1 449 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 OPN5Q6U736 354 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 HIST2H3AQ71DI3 136 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 OR9K2Q8NGE7 335 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 C14orf79Q96F83 325 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 WFDC1Q9HC57 220 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 DECR2Q9NUI1 292 aa11.52□□□□□ -0.56
ACTN1-202ENST00000376839 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 FAM221AA4D161 298 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 TOX3O15405 576 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-202ENST00000376839 XRCC2O43543 280 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 NME2P1O60361 137 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 ECI1P42126 302 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 FHITP49789 147 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF133P52736 654 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-202ENST00000376839 CCL7P80098 99 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms