RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
CCHCR1-201ENST00000376266 LOC400499M0QZD8 3231 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 BTBD17A6NE02 478 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 LIFP15018 202 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 S1PR1P21453 382 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 FAM3AP98173 230 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 SURF2Q15527 256 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF674Q2M3X9 581 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CATSPERDQ86XM0 798 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 KDM8Q8N371 416 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 PNLDC1Q8NA58 520 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CTHRC1Q96CG8 243 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 SCRT1Q9BWW7 348 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 HHLA2Q9UM44 414 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 HDGFL3Q9Y3E1 203 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 FBXO7Q9Y3I1 522 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 PUS1Q9Y606 427 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 HS3ST3B1Q9Y662 390 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 SERINC4A6NH21 518 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 TSTD3H0UI37 97 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 F10P00742 488 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 OTX2P32243 289 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CCR4P51679 360 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 PKIAP61925 76 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CLN3Q13286 438 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 BIKQ13323 160 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 KCTD18Q6PI47 426 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CLEC9AQ6UXN8 241 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 UNQ6494/PRO21346Q6UXR6 183 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CCDC54Q8NEL0 328 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 CNTD2Q9H8S5 307 aa13.24□□□□□ -0.29
CCHCR1-201ENST00000376266 SEC14L6B5MCN3 397 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 TLX3O43711 291 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 GAPDHP04406 335 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 CAMLGP49069 296 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 TMEM33P57088 247 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 SPCS3P61009 180 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 OPN5Q6U736 354 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 CPEB2Q7Z5Q1 589 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 LMX1BO60663 402 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 ASAH2BP0C7U1 165 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF84P51523 738 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 UNC119Q13432 240 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 SSPNQ14714 243 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF321PQ8N8H1 164 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 DNAJA3Q96EY1 480 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 RBM14Q96PK6 669 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 OR8D2Q9GZM6 311 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
CCHCR1-201ENST00000376266 APC2O95996 2303 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LOC390937A0A1W2PQ73 354 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 XKRYO14609 159 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF264O43296 627 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 IFNA10P01566 189 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 PNMTP11086 282 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 ZNF708P17019 499 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 IL15RAQ13261 267 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 RPUSD3Q6P087 351 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 PPP1R32Q7Z5V6 425 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 NKAIN3Q8N8D7 197 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 SEMA6DQ8NFY4 1073 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LMF2Q9BU23 707 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LUZP4Q9P127 313 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 C19orf25Q9UFG5 118 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 EMC9Q9Y3B6 208 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LRP12Q9Y561 859 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LOC107986453A0A1B0GWG9 222 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 CYC1P08574 325 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 CHATP28329 748 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 THBS4P35443 961 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 CHAF1BQ13112 559 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 GNRHR2Q96P88 292 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 GPR61Q9BZJ8 451 aa13.22□□□□□ -0.29
CCHCR1-201ENST00000376266 LOC102723996A0A087X1L8 192 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 C11orf98E9PRG8 122 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 MASP2O00187 686 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 PPP1R2P9O14990 202 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 PRH1P02810 166 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 FHITP49789 147 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 UCP2P55851 309 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 SLC26A5P58743 744 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 TMEM104Q8NE00 496 aa13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 DAZLQ92904 295 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-201ENST00000376266 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms