RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPACA1Q9HBV2 294 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 ALKBH4Q9NXW9 302 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 ZMAT5Q9UDW3 170 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 IGHV1OR21-1A0A087WYE8 117 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1B0GV50 99 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 FOXI3A8MTJ6 420 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 JTBO76095 146 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 ARG1P05089 322 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 S100A9P06702 114 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 EPHA8P29322 1005 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 TRIM61Q5EBN2 209 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 NOXO1Q8NFA2 376 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 OR14K1Q8NGZ2 314 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 SSC4DQ8WTU2 575 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 MVB12AQ96EY5 273 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 RAB33BQ9H082 229 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 UBE2CO00762 179 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 ACKR3P25106 362 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 CDCP2Q5VXM1 449 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 SULF2Q8IWU5 870 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 EIF5A2Q9GZV4 153 aaKnown RBP12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 MOB1AQ9H8S9 216 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 KPTNQ9Y664 436 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 IGHG1P01857 330 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 QDPRP09417 244 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 GLB1P16278 677 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF14P17017 642 aaPredicted RBP12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 AGAP20933 346 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 GABRR1P24046 479 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 SNCAP37840 140 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 UBE2V2Q15819 145 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 GUK1Q16774 197 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 GUSBP11Q6P575 273 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 DOK3Q7L591 496 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 APCDD1LQ8NCL9 501 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 SLC25A43Q8WUT9 341 aaPredicted RBP12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 PIGTQ969N2 578 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 LIME1Q9H400 295 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 KLRF1Q9NZS2 232 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF581Q9P0T4 197 aa12.36□□□□□ -0.43
CLCNKA-202ENST00000375692 MASP2O00187 686 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 TXNL1O43396 289 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 DIRAS3O95661 229 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 SMIM6P0DI80 62 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 FCGR2AP12318 317 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 FAHP16930 419 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 RRADP55042 308 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 OR2B8PP59922 312 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 ADAM5Q6NVV9 412 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 SGPP2Q8IWX5 399 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF561Q8N587 486 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 POC1BQ8TC44 478 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 PGAM5Q96HS1 289 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 F5H5K5 113 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 MSTNO14793 375 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 XRCC2O43543 280 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 GAPDHP04406 335 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 NQO2P16083 231 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 FAM3AP98173 230 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 SLC25A47Q6Q0C1 308 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 SH3BGRL3Q9H299 93 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 R4GN57 208 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 U3KQA8 63 aa12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 CCL1P22362 96 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 PAX6P26367 422 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 SFTPDP35247 375 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 OPN5Q6U736 354 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF251Q9BRH9 671 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 TUBD1Q9UJT1 453 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1B0GX78 115 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 IFNA21P01568 189 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 S100A8P05109 93 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF84P51523 738 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF41P51814 821 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 RNF212Q495C1 297 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 CHRNA10Q9GZZ6 450 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms