RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF260Q3ZCT1 412 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM225Q6GV28 225 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 ZAR1Q86SH2 424 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 WDR5BQ86VZ2 330 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CDC20BQ86Y33 519 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 POC1BQ8TC44 478 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CGGBP1Q9UFW8 167 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-203ENST00000375315 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
C9orf3-203ENST00000375315 MED12Q93074 2177 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 MUC6Q6W4X9 2439 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 IL18BPO95998 194 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 KIR3DL2P43630 455 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 EGR3Q06889 387 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 IL15RAQ13261 267 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 PRTGQ2VWP7 1150 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 WDR38Q5JTN6 314 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 DCST2Q5T1A1 773 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 IFI44Q8TCB0 444 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 RHBDD1Q8TEB9 315 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 PTX4Q96A99 478 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 DGAT2Q96PD7 388 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 OR52A1Q9UKL2 312 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM14AQ9Y6G1 99 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 MEGF11A6BM72 1044 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CDRT15L2A8MXV6 281 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 AMBPP02760 352 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF708P17019 499 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 SERPINA2P20848 420 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 EPHA1P21709 976 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CCR4P51679 360 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 RAB38P57729 211 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CEBPEQ15744 281 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 RCC1LQ96I51 464 aaKnown RBP10.73□□□□□ -0.69
C9orf3-203ENST00000375315 TRIM2Q9C040 744 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 ARV1Q9H2C2 271 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 CBLN4Q9NTU7 201 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 PRR13Q9NZ81 148 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 FLRT3Q9NZU0 649 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 GPR132Q9UNW8 380 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 FHITP49789 147 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 SLC25A1P53007 311 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 CEBPGP53567 150 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 NSDHLQ15738 373 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 SLC22A6Q4U2R8 563 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 C16orf47Q6ZP98 133 aaPredicted RBP10.72□□□□□ -0.69
C9orf3-203ENST00000375315 SLC35G3Q8N808 338 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 OR4K15Q8NH41 348 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 FAM46BQ96A09 425 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF385AQ96PM9 386 aaKnown RBP10.72□□□□□ -0.69
C9orf3-203ENST00000375315 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 OCIAD1Q9NX40 245 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 DKKL1Q9UK85 242 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 MRPS18BQ9Y676 258 aaKnown RBP10.72□□□□□ -0.69
C9orf3-203ENST00000375315 A0A1B0GV50 99 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 DCDC2BA2VCK2 349 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 LDLRAD4O15165 306 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 SP9P0CG40 484 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 PGA5P0DJD9 388 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 MPLP40238 635 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF429Q86V71 674 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 C17orf82Q86X59 251 aaPredicted RBP10.72□□□□□ -0.69
C9orf3-203ENST00000375315 TAAR8Q969N4 342 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM230Q96A57 120 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 PRRX2Q99811 253 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 NIPSNAP3BQ9BS92 247 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 C5orf66Q9H5L9 145 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 WDR76Q9H967 626 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF346Q9UL40 294 aaKnown RBP10.72□□□□□ -0.69
C9orf3-203ENST00000375315 DMXL1Q9Y485 3027 aa10.72□□□□□ -0.69
C9orf3-203ENST00000375315 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 CCDC74BQ96LY2 380 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 TSSK2Q96PF2 358 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 RARRES2Q99969 163 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 RAB22AQ9UL26 194 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 C17orf105B2RV13 164 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 FTCDNL1E5RQL4 147 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 TP53I11O14683 189 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 CCL4P13236 92 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 PPP1CCP36873 323 aaKnown RBP10.71□□□□□ -0.69
C9orf3-203ENST00000375315 CDKN2AP42771 156 aaKnown RBP10.71□□□□□ -0.69
C9orf3-203ENST00000375315 OR3A1P47881 315 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 C5orf34Q96MH7 638 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 LYRM4Q9HD34 91 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 Q9N2J8 555 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 TAS2R4Q9NYW5 299 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
C9orf3-203ENST00000375315 GEMIN2O14893 280 aaKnown RBP10.71□□□□□ -0.7
C9orf3-203ENST00000375315 TK1P04183 234 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 TDGF1P13385 188 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 PRPS1P60891 318 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 RAB35Q15286 201 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms