RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 HIST2H3AQ71DI3 136 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 SLC16A14Q7RTX9 510 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 C6orf201Q7Z4U5 140 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 ZNF565Q8N9K5 539 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 CD300LFQ8TDQ1 290 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 PGAM5Q96HS1 289 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 S100A13Q99584 98 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 PBDC1Q9BVG4 233 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 GON4LQ3T8J9 2241 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 C5orf63A6NC05 138 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 PPIHO43447 177 aaKnown RBP18.52■□□□□ 0.55
UPF3A-202ENST00000375299 TRAF3IP2O43734 574 aaPredicted RBP18.52■□□□□ 0.55
UPF3A-202ENST00000375299 PRH1P02810 166 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 MAS1LP35410 378 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 ARL4DP49703 201 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 C1QL4Q86Z23 238 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 LYZL4Q96KX0 146 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 FBXO7Q9Y3I1 522 aa18.52■□□□□ 0.55
UPF3A-202ENST00000375299 CEP290O15078 2479 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 ARID1AO14497 2285 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 FER1L5A0AVI2 2057 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 ETV2O00321 342 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-202ENST00000375299 IGLV3-1P01715 115 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 FBP1P09467 338 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 ZNF43P17038 809 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 KCNMB1Q16558 191 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 ADPRHL1Q8NDY3 354 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 HPSE2Q8WWQ2 592 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 RLN3Q8WXF3 142 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 HDHD3Q9BSH5 251 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-202ENST00000375299 ELL3Q9HB65 397 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-202ENST00000375299 TRIOO75962 3097 aa18.51■□□□□ 0.55
UPF3A-202ENST00000375299 METTL12A8MUP2 240 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 C1QL1O75973 258 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 IFNA17P01571 189 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 PIGPP57054 158 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 SMAD4Q13485 552 aaKnown RBP18.5■□□□□ 0.55
UPF3A-202ENST00000375299 UBE2V2Q15819 145 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 GPR157Q5UAW9 335 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 THAP3Q8WTV1 239 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-202ENST00000375299 BCL2L14Q9BZR8 327 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 SH3BGRL3Q9H299 93 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 ANXA10Q9UJ72 324 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 KCNIP3Q9Y2W7 256 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 TRBV23-1A0A0A0MS06 115 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 FCGR2AP12318 317 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 GABRR1P24046 479 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 TMEM187Q14656 261 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 SHISA6Q6ZSJ9 500 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 SLC38A9Q8NBW4 561 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 PLEKHJ1Q9NW61 149 aa18.5■□□□□ 0.55
UPF3A-202ENST00000375299 XRCC2O43543 280 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 NME1P15531 152 aaKnown RBP18.49■□□□□ 0.55
UPF3A-202ENST00000375299 CHATP28329 748 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 ZNF41P51814 821 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-202ENST00000375299 CLINT1Q14677 625 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 NCMAPQ5T1S8 102 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 C17orf82Q86X59 251 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-202ENST00000375299 PLPP5Q8NEB5 264 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 OR6X1Q8NH79 312 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 MRGPRX4Q96LA9 322 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 NAA60Q9H7X0 242 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 SDHAF3Q9NRP4 125 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 MSTNO14793 375 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 DIRAS3O95661 229 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 QDPRP09417 244 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 OR5H8P0DN80 308 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 OR13C7P0DN81 318 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 TMEM225BP0DP42 221 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 ZNF133P52736 654 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-202ENST00000375299 FOXL2P58012 376 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 SP6Q3SY56 376 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 LFNGQ8NES3 379 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 POC1BQ8TC44 478 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 STT3BQ8TCJ2 826 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 YPEL4Q96NS1 127 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 LIME1Q9H400 295 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 ZDHHC8Q9ULC8 765 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 HDGFL3Q9Y3E1 203 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 V9GYS6 101 aa18.49■□□□□ 0.55
UPF3A-202ENST00000375299 A0A1B0GW64 132 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 C2CD4DB7Z1M9 353 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 GATCO43716 136 aaKnown RBP18.48■□□□□ 0.55
UPF3A-202ENST00000375299 OPN1LWP04000 364 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 OR5AC1P0C628 307 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 RPS23P62266 143 aaKnown RBP18.48■□□□□ 0.55
UPF3A-202ENST00000375299 PLPPR5Q32ZL2 321 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 SLC25A53Q5H9E4 307 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 PLXDC2Q6UX71 529 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 HAS2Q92819 552 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 A0A1B0GX78 115 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 DHRS3O75911 302 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 FAHP16930 419 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 CTSSP25774 331 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 DEFB133Q30KQ1 61 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 WDSUB1Q8N9V3 476 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 HSD17B11Q8NBQ5 300 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 TOMM40LQ969M1 308 aa18.48■□□□□ 0.55
UPF3A-202ENST00000375299 PIGTQ969N2 578 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms