RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RAF1P04049 648 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 ADRB1P08588 477 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 ST3GAL2Q16842 350 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 SEZ6L2Q6UXD5 910 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 SLC16A12Q6ZSM3 486 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 SPAG17Q6Q759 2223 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM30CPA0ZSE6 113 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 CBY3A6NI87 242 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 LYZP61626 148 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 MCHR2Q969V1 340 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 OCIAD1Q9NX40 245 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 ZMIZ1Q9ULJ6 1067 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 TRAV34A0A0B4J273 112 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 EPXP11678 715 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF32P17041 273 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 PABPC1L2AQ5JQF8 200 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 ETFDHQ16134 617 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 SLC38A6Q8IZM9 456 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 LFNGQ8NES3 379 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TMPRSS5Q9H3S3 457 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 UCK1Q9HA47 277 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 PPIL1Q9Y3C6 166 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 KLHDC8BQ8IXV7 354 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 GNPNAT1Q96EK6 184 aaPredicted RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 SLC26A1Q9H2B4 701 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TPPP2P59282 170 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TIAL1Q01085 375 aaKnown RBP eCLIP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CCL19Q99731 98 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TBX21Q9UL17 535 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 IGKV3-15P01624 115 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 C1QBP02746 253 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 SBK3P0C264 359 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 FAM53BQ14153 422 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 LURAP1Q96LR2 239 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 UFC1Q9Y3C8 167 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 HDGFL3Q9Y3E1 203 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 LPAR6P43657 344 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 ENDOGQ14249 297 aaKnown RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 PWWP2BQ6NUJ5 590 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 TP53I13Q8NBR0 393 aaPredicted RBP13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 SCPEP1Q9HB40 452 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
NOTCH4-201ENST00000375023 CD37P11049 281 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 EVX1P49640 407 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 AQP6Q13520 282 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 TOMM34Q15785 309 aaPredicted RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF596Q8TC21 504 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 SIGLEC14Q08ET2 396 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 RIMKLAQ8IXN7 391 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 LSM2Q9Y333 95 aaKnown RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 JUNBP17275 347 aaPredicted RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 G6PCP35575 357 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 RPL13AP40429 203 aaKnown RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 KISS1Q15726 138 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 LY6EQ16553 131 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 FNDC7Q5VTL7 733 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 PTBP3O95758 552 aaKnown RBP13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 BTG1P62324 171 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 ACER2Q5QJU3 275 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 LINC00052Q96N35 136 aa13.12□□□□□ -0.31
NOTCH4-201ENST00000375023 MASP2O00187 686 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 CT62P0C5K7 136 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 BCL2L2Q92843 193 aaPredicted RBP13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 RNASEK-C17orf49H0YIS7 233 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 HTRA4P83105 476 aaPredicted RBP13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 ASAH1Q13510 395 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TNXAQ16473 311 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TUBA4BQ9H853 241 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms