RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MRPS18CQ9Y3D5 142 aaKnown RBP18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 IGLV1-36A0A0B4J1U3 117 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 APBB3O95704 486 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 MMP16P51512 607 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 ERVFC1-1P60608 527 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 H3F3AP84243 136 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 PAX5Q02548 391 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 GLIPR1L1Q6UWM5 242 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 CDH20Q9HBT6 801 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 FGF22Q9HCT0 170 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 SRPK3Q9UPE1 567 aa18.11■□□□□ 0.49
TMEFF1-201ENST00000374879 METTL15P1P0C7V9 234 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 COL10A1Q03692 680 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 ZNF880Q6PDB4 577 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 APOOQ9BUR5 198 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 LYRM4Q9HD34 91 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 DKKL1Q9UK85 242 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 TGOLN2O43493 480 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 EML2O95834 649 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 TK1P04183 234 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 GABRR1P24046 479 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 ZNF93P35789 620 aaPredicted RBP18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 RND2P52198 227 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 GAGE1Q13065 139 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 GPR157Q5UAW9 335 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 KIR3DX1Q9H7L2 352 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 TBC1D29Q9UFV1 150 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 HSF4Q9ULV5 492 aa18.1■□□□□ 0.49
TMEFF1-201ENST00000374879 SLC31A1O15431 190 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 HSPB1P04792 205 aaKnown RBP18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 SEC13P55735 322 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 CD226Q15762 336 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 LINC00346Q8IVM7 164 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 VSTM2LQ96N03 204 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 SPEGQ15772 3267 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 CLDN34H7C241 214 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 CRYABP02511 175 aaKnown RBP18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 APODP05090 189 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 HERPUD1Q15011 391 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 POMZP3Q6PJE2 187 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 C17orf78Q8N4C9 275 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 PLA2G2FQ9BZM2 168 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 AK3Q9UIJ7 227 aa18.09■□□□□ 0.49
TMEFF1-201ENST00000374879 TRBV23OR9-2A0A075B6M9 112 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 NSG1A0A0A6YYJ2 146 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 LINC00614P0C842 121 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 FOXF1Q12946 379 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 ACKR1Q16570 336 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 SP6Q3SY56 376 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 DMRTA1Q5VZB9 504 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 REEP6Q96HR9 211 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 WNT5BQ9H1J7 359 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 OBP2AQ9NY56 170 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 FBLN5Q9UBX5 448 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 SPACA6W5XKT8 324 aa18.08■□□□□ 0.49
TMEFF1-201ENST00000374879 CDC14BO60729 498 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 OR5AC1P0C628 307 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 ATP6V0CP27449 155 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF506Q5JVG8 444 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF776Q68DI1 518 aaPredicted RBP18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 P4HA3Q7Z4N8 544 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 YAF2Q8IY57 180 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM160A2Q8N612 972 aaPredicted RBP18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 BCORP1Q8N888 145 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 PADI1Q9ULC6 663 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 COA3Q9Y2R0 106 aaPredicted RBP18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 HEBP2Q9Y5Z4 205 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 CACNA1IQ9P0X4 2223 aa18.08■□□□□ 0.48
TMEFF1-201ENST00000374879 XKRY2A2RUG3 117 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 B4DEV8 164 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF10P21506 573 aaPredicted RBP18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 NCR3LG1Q68D85 454 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 BTNL3Q6UXE8 466 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 SULF2Q8IWU5 870 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 SLC22A18Q96BI1 424 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 HIST1H2AAQ96QV6 131 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 CABLES2Q9BTV7 478 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 TRBV24-1A0A075B6N3 115 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 DHRS7CA6NNS2 312 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 AHSA1O95433 338 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 RPLP1P05386 114 aaKnown RBP18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 GUSBP08236 651 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 HAS2Q92819 552 aa18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 MRPS28Q9Y2Q9 187 aaKnown RBP18.07■□□□□ 0.48
TMEFF1-201ENST00000374879 PRSS38A1L453 326 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 CT45A8P0DMV1 189 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 CT45A9P0DMV2 189 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 OR3A4PP47883 348 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 LBX1P52954 281 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 TAS2R46P59540 309 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 P2RY6Q15077 328 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 CT45A2Q5DJT8 189 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 RD3Q7Z3Z2 195 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 OR52M1Q8NGK5 317 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 DNASE2BQ8WZ79 361 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 SCARF2Q96GP6 870 aaPredicted RBP18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 C1orf147Q96MC9 270 aaPredicted RBP18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 S1PR5Q9H228 398 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms