RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ANAPC10Q9UM13 185 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 GPR132Q9UNW8 380 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 RIF1Q5UIP0 2472 aaKnown RBP13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 hCG_38984A0A1B0GV85 526 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 SYNGR4O95473 234 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 RLN2P04090 185 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF708P17019 499 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF24P17028 368 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 TBPP20226 339 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 SERPINF1P36955 418 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 PPIAP62937 165 aaKnown RBP13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 AIMP2Q13155 320 aaKnown RBP13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 ZMYND11Q15326 602 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 VAX1Q5SQQ9 334 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 Q6ZSR3 168 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 GPR160Q9UJ42 338 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 SVILO95425 2214 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 C5orf49A4QMS7 147 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 OR6C65A6NJZ3 312 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF850A8MQ14 1090 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 PCBD1P61457 104 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 TRIP6Q15654 476 aaKnown RBP13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 FAM74A1Q5RGS3 127 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 CLEC18BQ6UXF7 455 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 NUFIP2Q7Z417 695 aaKnown RBP13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 CALHM1Q8IU99 346 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 BHLHE23Q8NDY6 225 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 RTBDNQ9BSG5 229 aaPredicted RBP13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 TM2D1Q9BX74 207 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 PPA2Q9H2U2 334 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 FIGNL2A6NMB9 653 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 CD8AP01732 235 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 SP1P08047 785 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 PMP22Q01453 160 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 CNN3Q15417 329 aaKnown RBP13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF660Q6AZW8 331 aaPredicted RBP13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 C11orf87Q6NUJ2 197 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 FBXL14Q8N1E6 418 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 ARRDC1Q8N5I2 433 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 SPSB1Q96BD6 273 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 SULT4A1Q9BR01 284 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 AK3Q9UIJ7 227 aa13.85□□□□□ -0.19
CNKSR1-202ENST00000374253 C3orf80F5H4A9 247 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 DUS4LO95620 317 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF806P0C7X5 589 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 RPA2P15927 270 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 MPGP29372 298 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 SUPT4H1P63272 117 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 RPUSD3Q6P087 351 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 OR5AP2Q8NGF4 316 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 EMG1Q92979 244 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 C10orf35Q96D05 121 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 SHANK1Q9Y566 2161 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 MGAQ8IWI9 3026 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 EIF3IQ13347 325 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 AANATQ16613 207 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 ANKRD55Q3KP44 614 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 TMEM128Q5BJH2 165 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 ZSCAN4Q8NAM6 433 aaPredicted RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 CDC6Q99741 560 aa13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 VRK1Q99986 396 aaPredicted RBP13.84□□□□□ -0.19
CNKSR1-202ENST00000374253 IGKV3D-15A0A087WSY6 115 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 SPAARA0A1B0GVQ0 90 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 SERPINE3A8MV23 424 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 NGFP01138 241 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 NMBP08949 121 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 RRASP10301 218 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 PGAM2P15259 253 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 NPBWR2P48146 333 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 ARPC4P59998 168 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 FAM189A2Q15884 450 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 OR56B2PQ8NGI1 322 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 OR51F2Q8NH61 342 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 ZNF2Q9BSG1 426 aaPredicted RBP13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 LDAHQ9H6V9 325 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 COQ3Q9NZJ6 369 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 OSGIN2Q9Y236 505 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 AUP1Q9Y679 476 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 PRKACBP22694 351 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 CBX5P45973 191 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 IGFBP7Q16270 282 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 ACTBL2Q562R1 376 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 OVCH2Q7RTZ1 564 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 C5orf24Q7Z6I8 188 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 OR10AD1Q8NGE0 317 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 APH1AQ96BI3 265 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 PAPOLGQ9BWT3 736 aaKnown RBP13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 LIME1Q9H400 295 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.2
CNKSR1-202ENST00000374253 RNF222A6NCQ9 220 aa13.82□□□□□ -0.2
CNKSR1-202ENST00000374253 PDGFAP04085 211 aa13.82□□□□□ -0.2
CNKSR1-202ENST00000374253 LUMP51884 338 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms