RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 OR2F1Q13607 317 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 RBMS2Q15434 407 aaKnown RBP12.46□□□□□ -0.42
HMGA1-203ENST00000374116 KCNMB1Q16558 191 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.42
HMGA1-203ENST00000374116 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 ADGRE4PQ86SQ3 457 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 BIVMQ86UB2 503 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 RELL2Q8NC24 303 aaPredicted RBP12.46□□□□□ -0.42
HMGA1-203ENST00000374116 OR2V1Q8NHB1 315 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 GINS4Q9BRT9 223 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 BCL2L14Q9BZR8 327 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 EGLN1Q9GZT9 426 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 MOB1AQ9H8S9 216 aa12.46□□□□□ -0.42
HMGA1-203ENST00000374116 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 ARHGAP21Q5T5U3 1957 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 MEX3AA1L020 520 aaKnown RBP12.45□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 LDLRAD4O15165 306 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 BCL2L11O43521 198 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 CD8AP01732 235 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 TTRP02766 147 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 CRYBA1P05813 215 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 AKAIN1P0CW23 69 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 NR2C1P13056 603 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 ADCYAP1P18509 176 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 CA7P43166 264 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 KCNJ3P48549 501 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 PMPCAQ10713 525 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 GCNT2Q8N0V5 402 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 OR51A2Q8NGJ7 313 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 OR10S1Q8NGN2 331 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 PBOV1Q9GZY1 135 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 ALX4Q9H161 411 aaPredicted RBP12.45□□□□□ -0.42
HMGA1-203ENST00000374116 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 CGGBP1Q9UFW8 167 aaPredicted RBP12.45□□□□□ -0.42
HMGA1-203ENST00000374116 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
HMGA1-203ENST00000374116 LHFPL6Q9Y693 200 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 FLNCQ14315 2725 aa12.45□□□□□ -0.42
HMGA1-203ENST00000374116 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 TRAV14DV4A0A0A6YYC5 116 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FIGNL2A6NMB9 653 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 SIGLEC5O15389 551 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 HTR3BO95264 441 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 MELTFP08582 738 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FBP1P09467 338 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 SLC25A4P12235 298 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 PRF1P14222 555 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 HSD11B1P28845 292 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ACTBP60709 375 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 RAB5BP61020 215 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ACTG1P63261 375 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 PAN3Q58A45 887 aaKnown RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 C1orf185Q5T7R7 199 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 OR2W3Q7Z3T1 314 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 LYPD6Q86Y78 171 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 C9orf106Q8NAJ2 232 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 OR4C16Q8NGL9 310 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 SGK3Q96BR1 496 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FGGYQ96C11 551 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 CMSS1Q9BQ75 279 aaKnown RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 SLCO5A1Q9H2Y9 848 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 MEMO1Q9Y316 297 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 GJE1A6NN92 205 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 AHRRA9YTQ3 701 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FGF16O43320 207 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 SYT7O43581 403 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 DOK2O60496 412 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 WDR1O75083 606 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 GTF2F2P13984 249 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 BTF3P20290 206 aaKnown RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 RAB6AP20340 208 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 BDKRB2P30411 391 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 PTGFRP43088 359 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 CASP6P55212 293 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 RNF212Q495C1 297 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 TMEM88Q6PEY1 159 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF813Q6ZN06 617 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 NAXEQ8NCW5 288 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 OR6N1Q8NGY5 312 aa12.44□□□□□ -0.42
HMGA1-203ENST00000374116 ERRFI1Q9UJM3 462 aaPredicted RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 PHF3Q92576 2039 aaKnown RBP12.44□□□□□ -0.42
HMGA1-203ENST00000374116 GOSR2O14653 212 aa12.43□□□□□ -0.42
HMGA1-203ENST00000374116 LMX1BO60663 402 aa12.43□□□□□ -0.42
HMGA1-203ENST00000374116 QDPRP09417 244 aa12.43□□□□□ -0.42
HMGA1-203ENST00000374116 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
HMGA1-203ENST00000374116 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms