RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF230Q9UIE0 474 aaPredicted RBP16.9■□□□□ 0.3
HDAC1-201ENST00000373548 ITGB1BP2Q9UKP3 347 aa16.9■□□□□ 0.3
HDAC1-201ENST00000373548 SIX6O95475 246 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 AMY2BP19961 511 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 PRDX4Q13162 271 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 NKAPLQ5M9Q1 402 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 FAM214BQ7L5A3 538 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 CALHM1Q8IU99 346 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 WBP1Q96G27 269 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 FGF23Q9GZV9 251 aaPredicted RBP16.89■□□□□ 0.29
HDAC1-201ENST00000373548 FN3KRPQ9HA64 309 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 PLEKHJ1Q9NW61 149 aa16.89■□□□□ 0.29
HDAC1-201ENST00000373548 GOSR2O14653 212 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 SFTPBP07988 381 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 DHRS2Q13268 280 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF169Q14929 603 aaPredicted RBP16.88■□□□□ 0.29
HDAC1-201ENST00000373548 SLC25A42Q86VD7 318 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 MAFIPQ8WZ33 124 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 GPR137Q96N19 417 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 PQLC2LA1A4F0 135 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 SNU13P55769 128 aaKnown RBP16.88■□□□□ 0.29
HDAC1-201ENST00000373548 PPA1Q15181 289 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 RTL6Q6ICC9 239 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 ARRDC1Q8N5I2 433 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 C12orf45Q8N5I9 185 aaPredicted RBP16.88■□□□□ 0.29
HDAC1-201ENST00000373548 OR5H2Q8NGV7 314 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 OR51F2Q8NH61 342 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 EMG1Q92979 244 aaKnown RBP16.88■□□□□ 0.29
HDAC1-201ENST00000373548 RADILQ96JH8 1075 aa16.88■□□□□ 0.29
HDAC1-201ENST00000373548 CST4P01036 141 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 PIGYQ3MUY2 71 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 LGALSLQ3ZCW2 172 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-201ENST00000373548 DCAF12L2Q5VW00 463 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 OSR2Q8N2R0 312 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF611Q8N823 705 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 C9orf106Q8NAJ2 232 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 SLC30A7Q8NEW0 376 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 TERB2Q8NHR7 220 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 HPSE2Q8WWQ2 592 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF629Q9UEG4 869 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-201ENST00000373548 HSF4Q9ULV5 492 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 DLL1O00548 723 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 MSTNO14793 375 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 KLK10O43240 276 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF35P13682 527 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 ZBTB25P24278 435 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 NDUFA5Q16718 116 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 RFPL4BQ6ZWI9 263 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 FBXL14Q8N1E6 418 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 CSNK2A3Q8NEV1 391 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 MARCH1Q8TCQ1 289 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 MRPS24Q96EL2 167 aaKnown RBP16.87■□□□□ 0.29
HDAC1-201ENST00000373548 HDHD3Q9BSH5 251 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-201ENST00000373548 OPN4Q9UHM6 478 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 CACNA1GO43497 2377 aa16.87■□□□□ 0.29
HDAC1-201ENST00000373548 CFAP47Q6ZTR5 3102 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 GEMIN2O14893 280 aaKnown RBP16.86■□□□□ 0.29
HDAC1-201ENST00000373548 HLA-AP01891 365 aaKnown RBP16.86■□□□□ 0.29
HDAC1-201ENST00000373548 CHATP28329 748 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 PPP1R1AQ13522 171 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 MPPED2Q15777 294 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 RPUSD3Q6P087 351 aaKnown RBP16.86■□□□□ 0.29
HDAC1-201ENST00000373548 SLC25A26Q70HW3 274 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 ZDHHC23Q8IYP9 409 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 ADAD2Q8NCV1 583 aaKnown RBP16.86■□□□□ 0.29
HDAC1-201ENST00000373548 WNT2BQ93097 391 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 FAAP24Q9BTP7 215 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 OPA3Q9H6K4 179 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 AKAP13Q12802 2813 aa16.86■□□□□ 0.29
HDAC1-201ENST00000373548 CD300LBA8K4G0 201 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 F5H5P2 479 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 LYZL6O75951 148 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 SLC22A5O76082 557 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 KIR2DL2P43627 348 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 TAS2R46P59540 309 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 TSPAN5P62079 268 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 TGFBR3Q03167 851 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 CEACAM21Q3KPI0 293 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 Q6ZT83 130 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 LYG2Q86SG7 212 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 MYPOPQ86VE0 399 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 CNEP1R1Q8N9A8 125 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 ZSCAN4Q8NAM6 433 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 OR51B6Q9H340 312 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF701Q9NV72 531 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 SLC23A1Q9UHI7 598 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 PRRC2CQ9Y520 2896 aaKnown RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 FRYQ5TBA9 3013 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 IGKV1D-8A0A087WSZ0 117 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 A0A1W2PR80 420 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 PROB1E7EW31 1015 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 TPOP07202 933 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 CELA3BP08861 270 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 ZNF14P17017 642 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 OR3A3P47888 321 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 ACSF3Q4G176 576 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-201ENST00000373548 FTMTQ8N4E7 242 aa16.85■□□□□ 0.29
HDAC1-201ENST00000373548 OR10AD1Q8NGE0 317 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms