RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 METTL12A8MUP2 240 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 K7EQS6 105 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 IGHEP01854 428 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 OPN1MWP04001 364 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 OPN1MW2P0DN77 364 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 OPN1MW3P0DN78 364 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 TDGF1P13385 188 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 S100A7P31151 101 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 CTHP32929 405 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 PTGER4P35408 488 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 ABHD17CQ6PCB6 329 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 ZFP62Q8NB50 900 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-201ENST00000373019 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 SLC25A44Q96H78 314 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-201ENST00000373019 TBX15Q96SF7 602 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 SLC5A6Q9Y289 635 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 YIPF1Q9Y548 306 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 CACNA1HO95180 2353 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 SCN2AQ99250 2005 aa8.42□□□□□ -1.06
SF3A3-201ENST00000373019 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 H7C1C5 153 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 LMX1BO60663 402 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 AGR2O95994 175 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 GALNSP34059 522 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 LCN6P62502 163 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 MFGE8Q08431 387 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ADIPOR2Q86V24 386 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 NKAIN3Q8N8D7 197 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 OR8G5Q8NG78 346 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 OR14L1PQ8NHC6 308 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 MAFAQ8NHW3 353 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 RHBDD1Q8TEB9 315 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 CNTD2Q9H8S5 307 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ELOVL3Q9HB03 270 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 LILRB3O75022 631 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SNRNP200O75643 2136 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 TNFSF13O75888 250 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 CD33P20138 364 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ASCL1P50553 236 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 PSG6Q00889 435 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ZIC1Q15915 447 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 TMEM241Q24JQ0 296 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 TRMT12Q53H54 448 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SLC24A4Q8NFF2 622 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 STT3BQ8TCJ2 826 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 MRPL24Q96A35 216 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ZNF2Q9BSG1 426 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 NICN1Q9BSH3 213 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.41□□□□□ -1.062e-6■■■□□ 18.8
SF3A3-201ENST00000373019 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 P4HTMQ9NXG6 502 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 B9D1Q9UPM9 204 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 INSL5Q9Y5Q6 135 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 E5RGE8 158 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 K7ESM1 405 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SCGB1D2O95969 90 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 EMDP50402 254 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 MEP1BQ16820 701 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 GCNT2Q8N0V5 402 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 STPG4Q8N801 248 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 THRSPQ92748 146 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SDSLQ96GA7 329 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 GPX7Q96SL4 187 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 MRPL22Q9NWU5 206 aaKnown RBP8.41□□□□□ -1.06
SF3A3-201ENST00000373019 NSG2Q9Y328 171 aa8.41□□□□□ -1.06
SF3A3-201ENST00000373019 FAM221AA4D161 298 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 HIDE1A8MVS5 230 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 C5orf67F2Z3F1 127 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 XRCC2O43543 280 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 NUPR1O60356 82 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 BCL6P41182 706 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 ALDH3B1P43353 468 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 TCEAL5Q5H9L2 206 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 MRPL43Q8N983 215 aaKnown RBP8.4□□□□□ -1.06
SF3A3-201ENST00000373019 SDF2L1Q9HCN8 221 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 ZNF780BQ9Y6R6 833 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 A0A0A6YYD4 124 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 TMEM238C9JI98 176 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 GPR137BO60478 399 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 AHSA1O95433 338 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 ZNF888P0CJ79 500 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-201ENST00000373019 SLC17A1Q14916 467 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 TAF9Q16594 264 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 PLAC9Q5JTB6 97 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 Q6ZNB5 142 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 CATSPERDQ86XM0 798 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 FAM160A2Q8N612 972 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-201ENST00000373019 TMEM37Q8WXS4 190 aa8.4□□□□□ -1.06
SF3A3-201ENST00000373019 HS3ST2Q9Y278 367 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms