RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TAS2R45P59539 299 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 POM121L2Q96KW2 1035 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 ZNFX1Q9P2E3 1918 aaKnown RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 GIPP09681 153 aaPredicted RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 RAB4AP20338 218 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 UBE2G1P62253 170 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 PLA1AQ53H76 456 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 TRAT1Q6PIZ9 186 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 SLC38A6Q8IZM9 456 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 EXOGQ9Y2C4 368 aaKnown RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 NCOR1O75376 2440 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 MASP2O00187 686 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 CEACAM3P40198 252 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 PRRX1P54821 245 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 C1orf185Q5T7R7 199 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 OR8B12Q8NGG6 310 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 MOB3AQ96BX8 217 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 ERRFI1Q9UJM3 462 aaPredicted RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 PDCD6O75340 191 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 HOXD4P09016 255 aaPredicted RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 KCNJ3P48549 501 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 RTP5Q14D33 572 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 HIST2H3PS2Q5TEC6 136 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 INO80CQ6PI98 192 aaPredicted RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 ZFP82Q8N141 532 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 OR10AD1Q8NGE0 317 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 FAAP24Q9BTP7 215 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 TDRD15B5MCY1 1934 aaKnown RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 HSBP1L1C9JCN9 74 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 TMPRSS2O15393 492 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 HRASP01112 189 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 SEMG1P04279 462 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 CT45A10P0DMU9 189 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 FGF9P31371 208 aaPredicted RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 ERGIC1Q969X5 290 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 PSENENQ9NZ42 101 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 NINQ8N4C6 2090 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 SNTB1Q13884 538 aaKnown RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 HS3ST3B1Q9Y662 390 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 HIST1H1DP16402 221 aaKnown RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 CREB3L2Q70SY1 520 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 SVBPQ8N300 66 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 OR52N4Q8NGI2 321 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
NDC1-201ENST00000371429 HES4Q9HCC6 221 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 OR6C3Q9NZP0 311 aa13.03□□□□□ -0.32
NDC1-201ENST00000371429 DLL1O00548 723 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 SSX4O60224 188 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 ERGP11308 486 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 FOXO1Q12778 655 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 OR5H6Q8NGV6 325 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 A0A0J9YW62 118 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 E5RGE8 158 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 JTBO76095 146 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 OR3A4PP47883 348 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 BPIFB3P59826 476 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 C6orf201Q7Z4U5 140 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 TMEM229BQ8NBD8 167 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.32
NDC1-201ENST00000371429 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 OR2H1Q9GZK4 316 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 PARP12Q9H0J9 701 aaKnown RBP13.02□□□□□ -0.32
NDC1-201ENST00000371429 SLC17A5Q9NRA2 495 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 NSG2Q9Y328 171 aa13.02□□□□□ -0.32
NDC1-201ENST00000371429 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 MAGEB1P43366 347 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 RAB7AP51149 207 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
NDC1-201ENST00000371429 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.33
NDC1-201ENST00000371429 ZNF75AQ96N20 296 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 NUPL2O15504 423 aaKnown RBP13.02□□□□□ -0.33
NDC1-201ENST00000371429 OR7C2O60412 319 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 SPINK2P20155 84 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 CLDN20P56880 219 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 UBE2G2P60604 165 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 MOGAT3Q86VF5 341 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 OR8B3Q8NGG8 313 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 MRGPRDQ8TDS7 321 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms