RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 MOB3CQ70IA8 216 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 PDZD9Q8IXQ8 264 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 FGFRL1Q8N441 504 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 TMEM185AQ8NFB2 350 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
VMA21-202ENST00000370361 HEXA-AS1Q9H8Q6 139 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 CLN6Q9NWW5 311 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 SNX5Q9Y5X3 404 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 R4GMQ9 66 aa13.22□□□□□ -0.29
VMA21-202ENST00000370361 ZAR1LA6NP61 321 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 H0YAE9 185 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 EBAG9O00559 213 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 RHBDL1O75783 438 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 MRPL3P09001 348 aaKnown RBP13.21□□□□□ -0.29
VMA21-202ENST00000370361 SELLP14151 372 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 FAHP16930 419 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
VMA21-202ENST00000370361 EFNB1P98172 346 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 KPNB1Q14974 876 aaKnown RBP13.21□□□□□ -0.29
VMA21-202ENST00000370361 SLX4IPQ5VYV7 408 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 HAGHLQ6PII5 290 aaPredicted RBP13.21□□□□□ -0.29
VMA21-202ENST00000370361 ACP7Q6ZNF0 438 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 LIAT1Q6ZQX7 453 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 Q6ZSR3 168 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 CALHM1Q8IU99 346 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 ELMOD2Q8IZ81 293 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 TMEM163Q8TC26 289 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.29
VMA21-202ENST00000370361 SEMA6AQ9H2E6 1030 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 TCF7L1Q9HCS4 588 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 OAZ3Q9UMX2 235 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 MAB21L2Q9Y586 359 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 V9GYS6 101 aa13.21□□□□□ -0.29
VMA21-202ENST00000370361 PRKYO43930 277 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 TTRP02766 147 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 PGA5P0DJD9 388 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 HAAOP46952 286 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 CAPZA1P52907 286 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 HCCSP53701 268 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 CXCR4P61073 352 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 PDLIM3Q53GG5 364 aaPredicted RBP13.2□□□□□ -0.3
VMA21-202ENST00000370361 AADACL4Q5VUY2 407 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 C12orf73Q69YU5 71 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 Q6ZSV7 163 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 ZNRF1Q8ND25 227 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 CIB1Q99828 191 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 PKIBQ9C010 78 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 RANBP3Q9H6Z4 567 aaPredicted RBP13.2□□□□□ -0.3
VMA21-202ENST00000370361 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
VMA21-202ENST00000370361 OR52A1Q9UKL2 312 aa13.2□□□□□ -0.3
VMA21-202ENST00000370361 ANKRD61A6NGH8 418 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 RFPL4AA6NLU0 287 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 RFPL4AL1F8VTS6 287 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 H3BNX3 289 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 PSMD9O00233 223 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
VMA21-202ENST00000370361 CCL1P22362 96 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 MPZP25189 248 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 RPL31P62899 125 aaKnown RBP13.19□□□□□ -0.3
VMA21-202ENST00000370361 TMED1Q13445 227 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 FAM185AQ8N0U4 392 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 OR51G2Q8NGK0 314 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 C10orf35Q96D05 121 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 RBM4BQ9BQ04 359 aaKnown RBP13.19□□□□□ -0.3
VMA21-202ENST00000370361 NRIP2Q9BQI9 281 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 ADGRL4Q9HBW9 690 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 FBLN5Q9UBX5 448 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 GTF2A1LQ9UNN4 478 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
VMA21-202ENST00000370361 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 M0R129 80 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 KCNAB3O43448 404 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 NXPH2O95156 264 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 RBP4P02753 201 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 KRT8P05787 483 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 PRDX2P32119 198 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 ERVFRD-1P60508 538 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 DEFA6Q01524 100 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
VMA21-202ENST00000370361 IL24Q13007 206 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 KLRD1Q13241 179 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 ZFP1Q6P2D0 407 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 TCEANCQ8N8B7 351 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 GABARAPL3Q9BY60 117 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 HES4Q9HCC6 221 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 SLC7A11Q9UPY5 501 aa13.18□□□□□ -0.3
VMA21-202ENST00000370361 SAC3D1A6NKF1 404 aa13.17□□□□□ -0.3
VMA21-202ENST00000370361 PRR32B1ATL7 298 aa13.17□□□□□ -0.3
VMA21-202ENST00000370361 ANGPTL7O43827 346 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms