RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CIB3Q96Q77 187 aaPredicted RBP16.22■□□□□ 0.19
SNX27-202ENST00000368841 MT-CO3P00414 261 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 COL9A1P20849 921 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 EVX1P49640 407 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 DOK1Q99704 481 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 THBS4P35443 961 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 TSPAN32Q96QS1 320 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 HDGFL3Q9Y3E1 203 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 CSN3P07498 182 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 TMEM92Q6UXU6 159 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 DND1Q8IYX4 353 aaKnown RBP16.21■□□□□ 0.19
SNX27-202ENST00000368841 YIPF6Q96EC8 236 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 NOL4LQ96MY1 436 aaPredicted RBP16.21■□□□□ 0.19
SNX27-202ENST00000368841 RHOFQ9HBH0 211 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 ZNF32P17041 273 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 ZNF793Q6ZN11 406 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 OR4F17Q8NGA8 305 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 FOXJ3Q9UPW0 622 aa16.21■□□□□ 0.19
SNX27-202ENST00000368841 PHOX2AO14813 284 aa16.21■□□□□ 0.18
SNX27-202ENST00000368841 OR5D13Q8NGL4 314 aa16.21■□□□□ 0.18
SNX27-202ENST00000368841 SLC25A19Q9HC21 320 aa16.21■□□□□ 0.18
SNX27-202ENST00000368841 CRYABP02511 175 aaKnown RBP16.2■□□□□ 0.18
SNX27-202ENST00000368841 CD40P25942 277 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 RNFT1Q5M7Z0 435 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 GVQW1Q8N7I0 195 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 HGDQ93099 445 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 SLC2A9Q9NRM0 540 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 LY86O95711 162 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 ACSM4P0C7M7 580 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 ERVS71-1P61550 626 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 KISS1Q15726 138 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 AANATQ16613 207 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 SMUG1Q53HV7 270 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 FOXB2Q5VYV0 432 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
SNX27-202ENST00000368841 ACTL6AO96019 429 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 OR5AL1P0C617 328 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 TRAPPC2P0DI81 140 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 TRAPPC2BP0DI82 140 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 ETFDHQ16134 617 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 Q6ZNX1 250 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 SFTPA2Q8IWL1 248 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 SPEM1Q8N4L4 309 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 TP53I13Q8NBR0 393 aaPredicted RBP16.2■□□□□ 0.18
SNX27-202ENST00000368841 EDARADDQ8WWZ3 215 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 CDCA4Q9BXL8 241 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 OCIAD1Q9NX40 245 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 CHRNA7P36544 502 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 ZNF485Q8NCK3 441 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 OTOSQ8NHW6 89 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 ZNF716A6NP11 495 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 CDX4O14627 284 aaPredicted RBP16.2■□□□□ 0.18
SNX27-202ENST00000368841 IL9P15248 144 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 CD200P41217 278 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 CAMPP49913 170 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 TMEM97Q5BJF2 176 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 AUP1Q9Y679 476 aa16.2■□□□□ 0.18
SNX27-202ENST00000368841 BCL2L11O43521 198 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 PRO1933Q9H354 126 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 GON4LQ3T8J9 2241 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 K7EQS6 105 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 FLYWCH2Q96CP2 140 aaKnown RBP16.19■□□□□ 0.18
SNX27-202ENST00000368841 C10orf90Q96M02 699 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 MGPP08493 103 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 HNRNPA3P51991 378 aaKnown RBP16.19■□□□□ 0.18
SNX27-202ENST00000368841 TSPO2Q5TGU0 170 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 ETFRF1Q6IPR1 90 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 TOMM20LQ6UXN7 152 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 SLC36A1Q7Z2H8 476 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 LAMB1P07942 1786 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 TMEM229BQ8NBD8 167 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 PCDHGA9Q9Y5G4 932 aaKnown RBP16.19■□□□□ 0.18
SNX27-202ENST00000368841 FAM24AA6NFZ4 105 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 MASP2O00187 686 aa16.19■□□□□ 0.18
SNX27-202ENST00000368841 TRIP6Q15654 476 aaKnown RBP16.19■□□□□ 0.18
SNX27-202ENST00000368841 TGOLN2O43493 480 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 CTSVO60911 334 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 TMIGD3P0DMS9 266 aaPredicted RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 TNFRSF1AP19438 455 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 BCL3P20749 454 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 TOMM34Q15785 309 aaPredicted RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 CT55Q8WUE5 264 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 PLEKHA2Q9HB19 425 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 WASHC3Q9Y3C0 194 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 HIST1H3AP68431 136 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 MRPL58Q14197 206 aaKnown RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 OR5V1Q9UGF6 321 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 LMO7DNF2Z398 122 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 MS4A18H0YCH9 400 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 MS4A18Q3C1V0 323 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 NHLRC1Q6VVB1 395 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 OR4A4PQ8NGN8 299 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 LILRB1Q8NHL6 650 aaPredicted RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 NAT8BQ9UHF3 227 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 C3orf85A0A1B0GTC6 90 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 GPR3P46089 330 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 SLC38A11Q08AI6 406 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 C1orf210Q8IVY1 113 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 LINC01465Q8N7H1 131 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 VAMP8Q9BV40 100 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms