RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 AQP10Q96PS8 301 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 NAA11Q9BSU3 229 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 CHST5Q9GZS9 411 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 METTL9Q9H1A3 318 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 PCDHGA1Q9Y5H4 931 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 SLC33A1O00400 549 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 NME2P1O60361 137 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 TRAPPC6AO75865 159 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 IGHV3-9P01782 118 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 PRH1P02810 166 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 KLK3P07288 261 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 ASCL1P50553 236 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 TMEM33P57088 247 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 LSM6P62312 80 aaKnown RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 MEX3BQ6ZN04 569 aaKnown RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 MAML2Q8IZL2 1156 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-202ENST00000367279 PP6455Q8WZ26 134 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 DNASE2BQ8WZ79 361 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 SGK3Q96BR1 496 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 BORCS8Q96FH0 119 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 SHDQ96IW2 340 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 AKR1E2Q96JD6 320 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 AK3Q9UIJ7 227 aa10.78□□□□□ -0.68
PTPN7-202ENST00000367279 SGCEO43556 437 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 ACKR3P25106 362 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 ITGA3P26006 1051 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 ETV3LQ6ZN32 361 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 SPEM1Q8N4L4 309 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 FAM89BQ8N5H3 189 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 ADAMTS17Q8TE56 1095 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 C20orf24Q9BUV8 137 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 TMEM100Q9NV29 134 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 KCNIP3Q9Y2W7 256 aa10.77□□□□□ -0.68
PTPN7-202ENST00000367279 ZNF728P0DKX0 622 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 CCNOP22674 350 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 PIGYQ3MUY2 71 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 SLC22A25Q6T423 547 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 OPN5Q6U736 354 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 IL34Q6ZMJ4 242 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 OR14L1PQ8NHC6 308 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 CRLF2Q9HC73 371 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 GHRLQ9UBU3 117 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.69
PTPN7-202ENST00000367279 A0A0J9YW62 118 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PMS2P1A4D2B8 440 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ETV2O00321 342 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 RPS2P15880 293 aaKnown RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 EPHA8P29322 1005 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 HTR5AP47898 357 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PIGCQ92535 297 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PRRX2Q99811 253 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 IGLV3-32A0A0A0MS00 114 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 GEMIN2O14893 280 aaKnown RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 TSPAN15O95858 294 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 OR8U9P0C7N5 309 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 NAT2P11245 290 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 SSR4P51571 173 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PEA15Q15121 130 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 KCNMB1Q16558 191 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 HFEQ30201 348 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 RPUSD3Q6P087 351 aaKnown RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 FADS6Q8N9I5 356 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 OR8U1Q8NH10 309 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 SECTM1Q8WVN6 248 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 EIF5A2Q9GZV4 153 aaKnown RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ZFP57Q9NU63 452 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ANAPC10Q9UM13 185 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 TOX3O15405 576 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 CCL4P13236 92 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 KCNJ3P48549 501 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 NOVA1P51513 510 aaKnown RBP10.76□□□□□ -0.69
PTPN7-202ENST00000367279 CAV2P51636 162 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PCOLCEQ15113 449 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 C9orf135Q5VTT2 229 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 CRIP3Q6Q6R5 217 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 PLXDC2Q6UX71 529 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 HSD17B11Q8NBQ5 300 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 RXFP4Q8TDU9 374 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 DUSP23Q9BVJ7 150 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 SRXN1Q9BYN0 137 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 DNAJB11Q9UBS4 358 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 SHANK1Q9Y566 2161 aa10.76□□□□□ -0.69
PTPN7-202ENST00000367279 CCDC163A0A0D9SF12 145 aa10.75□□□□□ -0.69
PTPN7-202ENST00000367279 A0A0U1RQV5 110 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms