RNA–Protein interactions for RNA: ENST00000366732.5

MRPL55-206, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-206ENST00000366732 SMIM19Q96E16 107 aa13.2□□□□□ -0.3
MRPL55-206ENST00000366732 ZNF184Q99676 751 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-206ENST00000366732 PKIBQ9C010 78 aa13.2□□□□□ -0.3
MRPL55-206ENST00000366732 ZCCHC4Q9H5U6 513 aa13.2□□□□□ -0.3
MRPL55-206ENST00000366732 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
MRPL55-206ENST00000366732 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-206ENST00000366732 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■□ 19.6
MRPL55-206ENST00000366732 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 A8MXK9 166 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 MAGEB3O15480 346 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 PHF1O43189 567 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-206ENST00000366732 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
MRPL55-206ENST00000366732 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
MRPL55-206ENST00000366732 MTCP1P56278 107 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 SEC61A1P61619 476 aaKnown RBP13.19□□□□□ -0.3
MRPL55-206ENST00000366732 LYPD2Q6UXB3 125 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 LHFPL2Q6ZUX7 228 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 FAM90A1Q86YD7 464 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 CPNE2Q96FN4 548 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-206ENST00000366732 DNTTIP1Q9H147 329 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 NLKQ9UBE8 527 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 KAAG1Q9UBP8 84 aa13.19□□□□□ -0.3
MRPL55-206ENST00000366732 RGS10O43665 173 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 ACAA1P09110 424 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 SRD5A1P18405 259 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 HOXA4Q00056 320 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 IL24Q13007 206 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-206ENST00000366732 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 MKXQ8IYA7 352 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 GHSRQ92847 366 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 MED30Q96HR3 178 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 WDR13Q9H1Z4 485 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 C7orf69Q9H7B7 122 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 SNTG1Q9NSN8 517 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
MRPL55-206ENST00000366732 SVEP1Q4LDE5 3571 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 OR2AT4A6NND4 320 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 TNFRSF13BO14836 293 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-206ENST00000366732 GPR37O15354 613 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 NDUFB3O43676 98 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 SULT1B1O43704 296 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 SYNGR1O43759 233 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 ALX3O95076 343 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 NXPH2O95156 264 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 IFNA2P01563 188 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 MT-ND2P03891 347 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 EEF1B2P24534 225 aaKnown RBP13.17□□□□□ -0.3
MRPL55-206ENST00000366732 MPZP25189 248 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 SOX2P48431 317 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 SLC35A2P78381 396 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 BDH1Q02338 343 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 SCGB2A2Q13296 93 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 YIF1BQ5BJH7 314 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 LRRC10Q5BKY1 277 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 ATPAF1Q5TC12 328 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-206ENST00000366732 DMKNQ6E0U4 476 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-206ENST00000366732 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 ZNF485Q8NCK3 441 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 RPS4Y2Q8TD47 263 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 CCL13Q99616 98 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
MRPL55-206ENST00000366732 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 KIAA1324LA8MWY0 1029 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-206ENST00000366732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-206ENST00000366732 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-206ENST00000366732 LIPFP07098 398 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 HCKP08631 526 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-206ENST00000366732 CELP19835 753 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 RAB3AP20336 220 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 CRHBPP24387 322 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 GABRA2P47869 451 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 IL13RA1P78552 427 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 SPHARQ15513 63 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 STUMQ69YW2 141 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 ZNF841Q6ZN19 808 aa13.16□□□□□ -0.3
MRPL55-206ENST00000366732 CALHM1Q8IU99 346 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms