RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 NDUFB3O43676 98 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SLCO2B1O94956 709 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ONECUT2O95948 504 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 FUT6P51993 359 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 CTSCP53634 463 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 HLA-BQ31612 363 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ASIC5Q9NY37 505 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 TRAV1-2A0A0B4J238 106 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 MED19A0JLT2 244 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SMAD6O43541 496 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 PPIAP62937 165 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 PNRC1Q12796 327 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ARFGAP1Q8N6T3 406 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 HINT3Q9NQE9 182 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 GAGE10A6NGK3 116 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 CAMPP49913 170 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 Q56UQ5 140 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEFF1Q8IYR6 380 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 GLULP15104 373 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM207Q6UWW9 146 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 OXGR1Q96P68 337 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 CMC2Q9NRP2 79 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC5A6Q9Y289 635 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 PRSS1P07477 247 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 HLA-DRB3P79483 266 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 GSG1Q2KHT4 349 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 NKAIN4Q8IVV8 208 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 A0A1B0GV72 72 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 M0R1B8 84 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 ACP1P24666 158 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 SUMO3P55854 103 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM109BQ6ICB4 259 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC48A1Q6P1K1 146 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 NUFIP2Q7Z417 695 aaKnown RBP11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 SPICQ8N5J4 248 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 TM4SF18Q96CE8 201 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 MICBQ29980 383 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 RHOVQ96L33 236 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 PRRX2Q99811 253 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF426Q9BUY5 554 aa11.9□□□□□ -0.5
SRGAP3-201ENST00000360413 HMSDA8MTL9 139 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 MRM1Q6IN84 353 aaKnown RBP11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 VSTM2AQ8TAG5 236 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 MED12Q93074 2177 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 KLF7O75840 302 aaPredicted RBP11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF816Q0VGE8 651 aaPredicted RBP11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 OR5AS1Q8N127 324 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 CA10Q9NS85 328 aa11.9□□□□□ -0.51
SRGAP3-201ENST00000360413 PRKRAO75569 313 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 NDUFB6O95139 128 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 OR5C1Q8NGR4 320 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM40Q8WWA1 233 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 ACACAQ13085 2346 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 GPR3P46089 330 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 PRDX4Q13162 271 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 CD226Q15762 336 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 C6orf201Q7Z4U5 140 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 PTOV1Q86YD1 416 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 CYSLTR2Q9NS75 346 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 SLCO1C1Q9NYB5 712 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 OR6C3Q9NZP0 311 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 DAOP14920 347 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 FGF8P55075 233 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 GUSBP08236 651 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 CYBAP13498 195 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 OR1N1Q8NGS0 311 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 FBXO17Q96EF6 278 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms