RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC35B3Q9H1N7 401 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 OR2D2Q9H210 308 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 H0YIG0 161 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 DYNLT3P51808 116 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 HSPB2A8KAH6 182 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 CLDN34H7C241 214 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 C19orf57Q0VDD7 668 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 HSPB2Q16082 182 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 ETV3LQ6ZN32 361 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 ISOC2Q96AB3 205 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 SLC17A2O00624 439 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 RPS4XP62701 263 aaKnown RBP14.35□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF683Q8IZ20 524 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 FBXL6Q8N531 539 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 GPX7Q96SL4 187 aaPredicted RBP14.35□□□□□ -0.11
COL18A1-203ENST00000359759 A0A087WUJ7 227 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 SFT2D2O95562 160 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 NGFP01138 241 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 CCDC190Q86UF4 302 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR10G4Q8NGN3 311 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR10G9Q8NGN4 311 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR10G7Q8NGN6 311 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR1L6Q8NGR2 347 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR2V1Q8NHB1 315 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM56Q96MV1 263 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 CHD4Q14839 1912 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR5AC1P0C628 307 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF83P51522 516 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 WDR38Q5JTN6 314 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR1L3Q8NH93 324 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 OR10C1Q96KK4 312 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 IER2Q9BTL4 223 aa14.35□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1B0GTH9 108 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1B0GTL3 188 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 SARAFQ96BY9 339 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 CACNG5Q9UF02 275 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ARRDC5A6NEK1 342 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ADAM11O75078 769 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 NDUFB6O95139 128 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 FUT3P21217 361 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 PRSS12P56730 875 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
COL18A1-203ENST00000359759 OTOSQ8NHW6 89 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 FOXB1Q99853 325 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ABLIM3O94929 683 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ACTL6AO96019 429 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 C4AP0C0L4 1744 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 C4BP0C0L5 1744 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 COX7A1P24310 79 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF141Q15928 474 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 SCGB1D4Q6XE38 83 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM208Q9BTX3 173 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 R3HDMLQ9H3Y0 253 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A087X0M5 115 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1B0GX30 115 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 BCL3P20749 454 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 CD1BP29016 333 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 SPPL3Q8TCT6 385 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 PLA2G3Q9NZ20 509 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1W2PRD5 423 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1W2PRF3 423 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 A0A1W2PRM7 423 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 DAOP14920 347 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 TRAT1Q6PIZ9 186 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 ASB13Q8WXK3 278 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM9BQ9NQ34 198 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 TAAR3PQ9P1P4 343 aa14.34□□□□□ -0.11
COL18A1-203ENST00000359759 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.11
COL18A1-203ENST00000359759 ST8SIA5O15466 376 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 DNPH1O43598 174 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 SIGIRRQ6IA17 410 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF788Q6ZQV5 615 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 LINC00052Q96N35 136 aa14.33□□□□□ -0.11
COL18A1-203ENST00000359759 MEOX2P50222 304 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 DHRS2Q13268 280 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 WIPI1Q5MNZ9 446 aaPredicted RBP14.33□□□□□ -0.12
COL18A1-203ENST00000359759 ATP5SQ99766 215 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 MS4A18H0YCH9 400 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 CRYBA1P05813 215 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 KISS1Q15726 138 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 MS4A18Q3C1V0 323 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 GPR87Q9BY21 358 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 RASL12Q9NYN1 266 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 TREM2Q9NZC2 230 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 GSG1Q2KHT4 349 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 GVQW1Q8N7I0 195 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 ELSPBP1Q96BH3 223 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 OR4C46A6NHA9 309 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 RGPD2P0DJD1 1756 aa14.33□□□□□ -0.12
COL18A1-203ENST00000359759 RHBDL1O75783 438 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 AREGP15514 252 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 RSPO2Q6UXX9 243 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-203ENST00000359759 TUSC5Q8IXB3 177 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms