RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CDH24Q86UP0 819 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 C19orf18Q8NEA5 215 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 OR5A2Q8NGI9 324 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 SETD6Q8TBK2 473 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 HPSE2Q8WWQ2 592 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 ZC3HAV1LQ96H79 300 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 ABHD1Q96SE0 405 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 MICU1Q9BPX6 476 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 URM1Q9BTM9 101 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 ELL3Q9HB65 397 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 PURGQ9UJV8 347 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 HCFC1P51610 2035 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 NKX2-6A6NCS4 301 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 ZNF732B4DXR9 585 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 GSTZ1O43708 216 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 TIMM8AO60220 97 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 CDC14BO60729 498 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 CRTAPO75718 401 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 CLDN14O95500 239 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 HLA-DQB1P01920 261 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 SERPINA2P20848 420 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 GLRXP35754 106 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 PTH2RP49190 550 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 PSG7Q13046 419 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 RSU1Q15404 277 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 TESK1Q15569 626 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 POC5Q8NA72 575 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 MINDY2Q8NBR6 621 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 PXT1Q8NFP0 134 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 OR8S1Q8NH09 359 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 SMIM4Q8WVI0 70 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 RADILQ96JH8 1075 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 RNF170Q96K19 258 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 GAL3ST1Q99999 423 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 NUDT16L1Q9BRJ7 211 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 RTL8AQ9BWD3 113 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 SLC22A4Q9H015 551 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
PDLIM5-203ENST00000359265 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ATP6V1G2-DDX39BF2Z307 99 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 GABARAPH6UMI1 98 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 SPRY1O43609 319 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ZG16O60844 167 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 LILRA1O75019 489 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 PLATP00750 562 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 THBDP07204 575 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 CHRM2P08172 466 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 MGMTP16455 207 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 CA6P23280 308 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 GPM6AP51674 278 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 GNG3P63215 75 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 DGCR2P98153 550 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 TRIM16LQ309B1 348 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 RNASE12Q5GAN4 147 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 SP5Q6BEB4 398 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ASCL4Q6XD76 172 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 BIVMQ86UB2 503 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 SAXO1Q8IYX7 474 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ZNF611Q8N823 705 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ACBD4Q8NC06 268 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 OR8G5Q8NG78 346 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 CHPT1Q8WUD6 406 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ITLN2Q8WWU7 325 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 DVL3Q92997 716 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 TRIM63Q969Q1 353 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 THAP7Q9BT49 309 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 BANF2Q9H503 90 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
PDLIM5-203ENST00000359265 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 ANGPTL7O43827 346 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 HTR3BO95264 441 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 PTTG1O95997 202 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 CYB5AP00167 134 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 CPT2P23786 658 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 FABP6P51161 128 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 RPS27AP62979 156 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 ASAH1Q13510 395 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 OR8G1Q15617 311 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 ZNF57Q68EA5 555 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 C22orf34Q6ZV56 151 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 C1QL2Q7Z5L3 287 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 ZNF573Q86YE8 665 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
PDLIM5-203ENST00000359265 OR56B1Q8NGI3 324 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms