RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RER1O15258 196 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 KISS1Q15726 138 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 TUSC1Q2TAM9 212 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 FNDC7Q5VTL7 733 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 TCTE3Q8IZS6 198 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 METTL12A8MUP2 240 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 FGF2P09038 288 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 GABRG2P18507 467 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 SRP14P37108 136 aaKnown RBP16.41■□□□□ 0.22
SHANK1-202ENST00000359082 HIST1H3AP68431 136 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 IGFBP7Q16270 282 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 GPR137Q96N19 417 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 OR5AL1P0C617 328 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 RPL34P49207 117 aaKnown RBP16.41■□□□□ 0.22
SHANK1-202ENST00000359082 HFEQ30201 348 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF788Q6ZQV5 615 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 OR6S1Q8NH40 331 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 HSD17B10Q99714 261 aaKnown RBP16.41■□□□□ 0.22
SHANK1-202ENST00000359082 MBTPS2O43462 519 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 WNT1P04628 370 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 SBK3P0C264 359 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 CALHM3Q86XJ0 350 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 SPEM1Q8N4L4 309 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 ASB13Q8WXK3 278 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 TMEM37Q8WXS4 190 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 MSL2Q9HCI7 577 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 POMT1Q9Y6A1 747 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 SPEM2Q0P670 501 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 C6orf201Q7Z4U5 140 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 OR5D13Q8NGL4 314 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 GPR87Q9BY21 358 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 FGF8P55075 233 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-202ENST00000359082 TIAL1Q01085 375 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHANK1-202ENST00000359082 ETFRF1Q6IPR1 90 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 TMEM65Q6PI78 240 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF66Q6ZN08 573 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 TSPAN32Q96QS1 320 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
SHANK1-202ENST00000359082 LYZP61626 148 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 C12orf73Q69YU5 71 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 LRRC29Q8WV35 223 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 MCHR2Q969V1 340 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 TOLLIPQ9H0E2 274 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 MMP26Q9NRE1 261 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF716A6NP11 495 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 HRASP01112 189 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF260Q3ZCT1 412 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 PRRX2Q99811 253 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 MS4A18H0YCH9 400 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF737O75373 536 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 MS4A18Q3C1V0 323 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 OR1L3Q8NH93 324 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 VN1R1Q9GZP7 353 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 A0A0B4J2E0 115 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1B0GX12 115 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1W2PRD5 423 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1W2PRF3 423 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1W2PRM7 423 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 LILRA5A6NI73 299 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 LYZL6O75951 148 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 ITGBL1O95965 494 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-202ENST00000359082 SP1P08047 785 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 GLULP15104 373 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 CA5BP1Q8WTZ4 195 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 SLC26A1Q9H2B4 701 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 RNF224P0DH78 156 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 FZD5Q13467 585 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 LYPD8Q6UX82 237 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 OR1B1Q8NGR6 318 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
SHANK1-202ENST00000359082 SPINK2P20155 84 aa16.39■□□□□ 0.22
SHANK1-202ENST00000359082 TNFAIP6P98066 277 aaPredicted RBP16.39■□□□□ 0.22
SHANK1-202ENST00000359082 OR2W3Q7Z3T1 314 aa16.39■□□□□ 0.22
SHANK1-202ENST00000359082 RNF24Q9Y225 148 aa16.39■□□□□ 0.22
SHANK1-202ENST00000359082 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 K7ESF4 209 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 SPSB1Q96BD6 273 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 SLC6A13Q9NSD5 602 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 TREM2Q9NZC2 230 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 OR1A1Q9P1Q5 309 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 HIST1H1DP16402 221 aaKnown RBP16.39■□□□□ 0.21
SHANK1-202ENST00000359082 TM4SF19Q96DZ7 209 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 MAP6Q96JE9 813 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 TMEM208Q9BTX3 173 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 SLC25A22Q9H936 323 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 PPM1DO15297 605 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 SFT2D2O95562 160 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 MMP7P09237 267 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-202ENST00000359082 KIR2DS2P43631 304 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 OR5C1Q8NGR4 320 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 LMO7DNF2Z398 122 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 C3orf80F5H4A9 247 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 EPPINO95925 133 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 HTR1DP28221 377 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 CD200P41217 278 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 TOMM34Q15785 309 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-202ENST00000359082 MMP25Q9NPA2 562 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 DHRS3O75911 302 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms