RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 CYTIPO60759 359 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 IGF2P01344 180 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 CRHP06850 196 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 SSTP61278 116 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 ZNF90Q03938 601 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 NCR3LG1Q68D85 454 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 TXN2Q99757 166 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 V9GYS6 101 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 MEX3AA1L020 520 aaKnown RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 MBTPS2O43462 519 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 PTP4A3O75365 173 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 CRYAAP02489 173 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 INPP5JQ15735 1006 aaPredicted RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 FAM24BQ8N5W8 94 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 ERRFI1Q9UJM3 462 aaPredicted RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 IGHV1OR15-9A0A0B4J2B8 117 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 OR5AC1P0C628 307 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 SLC25A4P12235 298 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 SELEP16581 610 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 RPS4XP62701 263 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 ZNF816Q0VGE8 651 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 SKP2Q13309 424 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 RFLNBQ8N5W9 214 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 OR5C1Q8NGR4 320 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 MITD1Q8WV92 249 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 ADGRG7Q96K78 797 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 TRIB1Q96RU8 372 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 PCDHGA9Q9Y5G4 932 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 MTCH2Q9Y6C9 303 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 PDCD6O75340 191 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 TMEM33P57088 247 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 H3F3AP84243 136 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 JMJD6Q6NYC1 403 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 BVESQ8NE79 360 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 OR51I2Q9H344 312 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 GHITMQ9H3K2 345 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 FUT5Q11128 374 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CLEC18BQ6UXF7 455 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 ZNF574Q6ZN55 896 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CIB3Q96Q77 187 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 TRAF4Q9BUZ4 470 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 RYDENQ9NUL5 291 aaKnown RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 C20orf202A1L168 122 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 OR7C2O60412 319 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CLN5O75503 358 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 APOA2P02652 100 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 GNG3P63215 75 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 TMPRSS7Q7RTY8 843 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 S100A7AQ86SG5 101 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 CMTM2Q8TAZ6 248 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 MS4A7Q9GZW8 240 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 WDR13Q9H1Z4 485 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 ZNF331Q9NQX6 463 aaPredicted RBP12.18□□□□□ -0.46
VCP-201ENST00000358901 CA10Q9NS85 328 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 PCOLCE2Q9UKZ9 415 aa12.18□□□□□ -0.46
VCP-201ENST00000358901 DSPPQ9NZW4 1301 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 LRRC30A6NM36 301 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 PHOX2AO14813 284 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 ADAM20O43506 726 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 MBP02144 154 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 LIMS1P48059 325 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 TIGITQ495A1 244 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 TSPO2Q5TGU0 170 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 ZNF429Q86V71 674 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 PIK3IP1Q96FE7 263 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 OR10J4P0C629 311 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 UBE2G2P60604 165 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 RBPJQ06330 500 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 ZNF718Q3SXZ3 478 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms