RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OR8G5Q8NG78 346 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 SLX4Q8IY92 1834 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 LOC107986453A0A1B0GWG9 222 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 MBLAC1A4D2B0 266 aaPredicted RBP8.77□□□□□ -1.01
CHD3-202ENST00000358181 FRG2CA6NGY1 282 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 CTDSP2O14595 271 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 CSNK1DP48730 415 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 COMPP49747 757 aaPredicted RBP8.77□□□□□ -1.01
CHD3-202ENST00000358181 B3GNT8Q7Z7M8 397 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 PDPNQ86YL7 162 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 BEND2Q8NDZ0 799 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 FAM222BQ8WU58 562 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 NPAS1Q99742 590 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
CHD3-202ENST00000358181 INPP5EQ9NRR6 644 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 SPCS3P61009 180 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 HBA1P69905 142 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 ANKRD55Q3KP44 614 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 PAQR9Q6ZVX9 377 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 YAE1D1Q9NRH1 226 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 SLC2A10O95528 541 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 MT-ATP6P00846 226 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 GALR1P47211 349 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 PRLHRP49683 370 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 GDF7Q7Z4P5 450 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 L3HYPDHQ96EM0 354 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 RHNO1Q9BSD3 238 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 EDA2RQ9HAV5 297 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 NIT2Q9NQR4 276 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 A0A1B0GUH1 482 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 VAMP5O95183 116 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 LIMK1P53667 647 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 FGF8P55075 233 aaPredicted RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 CD81P60033 236 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 OR2V1Q8NHB1 315 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 EDARADDQ8WWZ3 215 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 RGP1Q92546 391 aaPredicted RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 TEAD1P28347 426 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ZNF121P58317 390 aaPredicted RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 FHL5Q5TD97 284 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SYT8Q8NBV8 401 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 STXBP6Q8NFX7 210 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SLCO1C1Q9NYB5 712 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 LINC01553A4QN01 128 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 CST7O76096 145 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 FGF2P09038 288 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 NMUP48645 174 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 TCTN3Q6NUS6 607 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 OR10A7Q8NGE5 316 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SCARB1Q8WTV0 552 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 RAX2Q96IS3 184 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 Q96M85 177 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 IGKV3D-20A0A0C4DH25 116 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 TMEM202A6NGA9 273 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 MPLP40238 635 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 CLDN18P56856 261 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SRSF5Q13243 272 aaKnown RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 NSUN5P1Q3KNT7 163 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 CADM4Q8NFZ8 388 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 OR5AP2Q8NGF4 316 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 IFT22Q9H7X7 185 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ZNF354AO60765 605 aaPredicted RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 CDX1P47902 265 aaPredicted RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 KCNJ3P48549 501 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SELENOTP62341 195 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 SMAD4Q13485 552 aaKnown RBP8.76□□□□□ -1.01
CHD3-202ENST00000358181 FAM219BQ5XKK7 198 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 LAX1Q8IWV1 398 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 OSR2Q8N2R0 312 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ASB13Q8WXK3 278 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 PLSCR2Q9NRY7 297 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 FBXL4Q9UKA2 621 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 ZDHHC8Q9ULC8 765 aa8.76□□□□□ -1.01
CHD3-202ENST00000358181 OR2T7P0C7T2 308 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PGFP49763 221 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PRDX1Q06830 199 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 CEACAM16Q2WEN9 425 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PKMYT1Q99640 499 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 NAA50Q9GZZ1 169 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 NTN4Q9HB63 628 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TRAV17A0A0B4J275 112 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 OR2W5A6NFC9 320 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PSCAO43653 123 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 NGFP01138 241 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TMEM128Q5BJH2 165 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 NSUN5P2Q63ZY6 315 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 SPINK14Q6IE38 97 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TMEM81Q6P7N7 255 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms