RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 RTL6Q6ICC9 239 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 C11orf88Q6PI97 169 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 TFAP2EQ6VUC0 442 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 HIST2H3AQ71DI3 136 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 NEK7Q8TDX7 302 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 MARS2Q96GW9 593 aaKnown RBP11.94□□□□□ -0.5
LSS-201ENST00000356396 ZNF486Q96H40 463 aaPredicted RBP11.94□□□□□ -0.5
LSS-201ENST00000356396 BCO1Q9HAY6 547 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 VSIG4Q9Y279 399 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 USP9XQ93008 2570 aaPredicted RBP11.94□□□□□ -0.5
LSS-201ENST00000356396 GOSR2O14653 212 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 WNT9BO14905 357 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 Q6ZPA2 131 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 OR1K1Q8NGR3 316 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 OR13C8Q8NGS7 320 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 POM121L2Q96KW2 1035 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 SYT3Q9BQG1 590 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 ETV7Q9Y603 341 aa11.94□□□□□ -0.5
LSS-201ENST00000356396 SERPINA5P05154 406 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 TGIF2LYQ8IUE0 185 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 LIME1Q9H400 295 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 DLL1O00548 723 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 C1QTNF9P0C862 333 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 NFYAP23511 347 aaPredicted RBP11.93□□□□□ -0.5
LSS-201ENST00000356396 APLNRP35414 380 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 H2BFSP57053 126 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 UBE2NP61088 152 aaKnown RBP11.93□□□□□ -0.5
LSS-201ENST00000356396 ECH1Q13011 328 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 LY6DQ14210 128 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 MPPED2Q15777 294 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 SP6Q3SY56 376 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
LSS-201ENST00000356396 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 RAB22AQ9UL26 194 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 PAIP2BQ9ULR5 123 aaKnown RBP11.93□□□□□ -0.5
LSS-201ENST00000356396 MGAT4AQ9UM21 535 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 FAM215AQ9Y5M1 114 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 V9GYS6 101 aa11.93□□□□□ -0.5
LSS-201ENST00000356396 LOC390937A0A1W2PQ73 354 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 LRP3O75074 770 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 PEX14O75381 377 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 NXPH3O95157 252 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 GABRA1P14867 456 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 GLRA1P23415 457 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 RBP2P50120 134 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 PLP2Q04941 152 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 MSMPQ1L6U9 139 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 BTN2A1Q7KYR7 527 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 CSNK2A3Q8NEV1 391 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 OR1J1Q8NGS3 322 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 OR4K15Q8NH41 348 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 SLC25A40Q8TBP6 338 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 WBP1Q96G27 269 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 CST11Q9H112 138 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 EIF3KQ9UBQ5 218 aaKnown RBP11.92□□□□□ -0.5
LSS-201ENST00000356396 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 CDIPTO14735 213 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 ICMTO60725 284 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 WDR1O75083 606 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 LPLP06858 475 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 PGAM2P15259 253 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 ACSF3Q4G176 576 aaPredicted RBP11.92□□□□□ -0.5
LSS-201ENST00000356396 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
LSS-201ENST00000356396 NOXA1Q86UR1 476 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 OR52H1Q8NGJ2 320 aa11.92□□□□□ -0.5
LSS-201ENST00000356396 CD300LBA8K4G0 201 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
LSS-201ENST00000356396 ACTL6AO96019 429 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 AKAIN1P0CW23 69 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 ZNF35P13682 527 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
LSS-201ENST00000356396 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 ZNF529Q6P280 563 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 ST8SIA4Q92187 359 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
LSS-201ENST00000356396 MTCH1Q9NZJ7 389 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 CLCF1Q9UBD9 225 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 NR2C1P13056 603 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 AMY2BP19961 511 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 RTP5Q14D33 572 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 C6orf183Q5T699 404 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 RIPPLY2Q5TAB7 128 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 EHFQ9NZC4 300 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 AK3Q9UIJ7 227 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 NUBP2Q9Y5Y2 271 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 ZNF462Q96JM2 2506 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 C13orf42A0A1B0GVH6 325 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 F5H5P2 479 aa11.91□□□□□ -0.5
LSS-201ENST00000356396 GSTZ1O43708 216 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms