RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TMEM249Q2WGJ8 235 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CCDC92Q53HC0 331 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TSPO2Q5TGU0 170 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 FAM166AQ6J272 317 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 VWA1Q6PCB0 445 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CORO6Q6QEF8 472 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF474Q6S9Z5 364 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF813Q6ZN06 617 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 COLCA1Q6ZS62 124 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 Q6ZT83 130 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SLC16A14Q7RTX9 510 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 LRRTM1Q86UE6 522 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 NR2C2APQ86WQ0 139 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SERPINA12Q8IW75 414 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TUSC5Q8IXB3 177 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 C1orf174Q8IYL3 243 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR5D14Q8NGL3 314 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR6M1Q8NGM8 313 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR13C3Q8NGS6 347 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR13C5Q8NGS8 318 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR1F12Q8NHA8 337 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 STARD4Q96DR4 205 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF799Q96GE5 643 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 DIRAS2Q96HU8 199 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TMEM204Q9BSN7 226 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OR2H1Q9GZK4 316 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SRRQ9GZT4 340 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 OPN3Q9H1Y3 402 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 PPIL3Q9H2H8 161 aaKnown RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ABCB9Q9NP78 766 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TMEM138Q9NPI0 162 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TUBG2Q9NRH3 451 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CENPMQ9NSP4 180 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ELOVL5Q9NYP7 299 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 PLEK2Q9NYT0 353 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 UPB1Q9UBR1 384 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 GHRLQ9UBU3 117 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 STEAP1Q9UHE8 339 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 LAMP3Q9UQV4 416 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CR1P17927 2039 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 A0A1B0GTI1 187 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 FABP12A6NFH5 140 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 PSMD9O00233 223 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 XRCC2O43543 280 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 SULT1B1O43704 296 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 TGM6O95932 706 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 IGHV4-39P01824 125 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 CLEC2LP0C7M8 214 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 UBBP0CG47 229 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ATF1P18846 271 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 RAB3AP20336 220 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 THBS4P35443 961 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 CDKN1AP38936 164 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 DDOSTP39656 456 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ALDH3B1P43353 468 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 SCN1BQ07699 218 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ASAH1Q13510 395 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 OXA1LQ15070 435 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF79Q15937 498 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 C3orf36Q3SXR2 165 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 C1orf100Q5SVJ3 147 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 IDNKQ5T6J7 187 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 FAM27D1Q5T7N8 215 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 PYHIN1Q6K0P9 492 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 TMEM53Q6P2H8 277 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 CNIH2Q6PI25 160 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 TFAP2EQ6VUC0 442 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 LINGO2Q7L985 606 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 NUFIP2Q7Z417 695 aaKnown RBP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 P4HA3Q7Z4N8 544 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 LYPD6Q86Y78 171 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 LAX1Q8IWV1 398 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 FTMTQ8N4E7 242 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF283Q8N7M2 679 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 CNEP1R1Q8N9A8 125 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 OR8B12Q8NGG6 310 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF671Q8TAW3 534 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 TRMT10AQ8TBZ6 339 aaKnown RBP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 AKAP1Q92667 903 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 SPSB4Q96A44 273 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 SPSB1Q96BD6 273 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 FBXO17Q96EF6 278 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 FOXN4Q96NZ1 517 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 C1QTNF5Q9BXJ0 243 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 CHST5Q9GZS9 411 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 MIXL1Q9H2W2 232 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 ESRP2Q9H6T0 727 aaKnown RBP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 METTL17Q9H7H0 456 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-201ENST00000355766 PPP1R3EQ9H7J1 279 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 SLC7A10Q9NS82 523 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 TBCCD1Q9NVR7 557 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 DAPK2Q9UIK4 370 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 V9GYS6 101 aa5.95□□□□□ -1.46
VPS13A-201ENST00000355766 MGAM2Q2M2H8 2515 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 IGHV4-30-2A0A087WSY4 118 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 GSTZ1O43708 216 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 CGAP01215 116 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 SOD3P08294 240 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 DANCRP0C864 163 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms